RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 ANAPC11Q9NYG5 84 aa2.12□□□□□ -2.07
NUP98-218ENST00000530516 COL16A1Q07092 1604 aaPredicted RBP2.12□□□□□ -2.07
NUP98-218ENST00000530516 KBTBD13C9JR72 458 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 GRAP2O75791 330 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 LY6G6DO95868 133 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 KRT6AP02538 564 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 KRT6BP04259 564 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 TSPY3P0CV98 308 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 TSPY8P0CW00 308 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 UMPSP11172 480 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 ODC1P11926 461 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 SKILP12757 684 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 FOSL2P15408 326 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 CCND3P30281 292 aaPredicted RBP2.11□□□□□ -2.07
NUP98-218ENST00000530516 KRT6CP48668 564 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 IGLV3-21P80748 117 aaPredicted RBP2.11□□□□□ -2.07
NUP98-218ENST00000530516 MFGE8Q08431 387 aaPredicted RBP2.11□□□□□ -2.07
NUP98-218ENST00000530516 LYPLAL1Q5VWZ2 237 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 WDR25Q64LD2 544 aaPredicted RBP2.11□□□□□ -2.07
NUP98-218ENST00000530516 ZNF730Q6ZMV8 503 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 ZNF600Q6ZNG1 722 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 WDR49Q8IV35 697 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 AQP12AQ8IXF9 295 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 BADQ92934 168 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 MR1Q95460 341 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 ZNF274Q96GC6 653 aaPredicted RBP2.11□□□□□ -2.07
NUP98-218ENST00000530516 CDHR1Q96JP9 859 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 MCCC1Q96RQ3 725 aaPredicted RBP2.11□□□□□ -2.07
NUP98-218ENST00000530516 EDEM3Q9BZQ6 932 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 TRIM7Q9C029 511 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 ZBP1Q9H171 429 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 NT5DC2Q9H857 520 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 SP140LQ9H930 580 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 VIPAS39Q9H9C1 493 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 FAM212BQ9NTI7 297 aaPredicted RBP2.11□□□□□ -2.07
NUP98-218ENST00000530516 CUTCQ9NTM9 273 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 NYAP2Q9P242 653 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 ZNF319Q9P2F9 582 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 POMT1Q9Y6A1 747 aa2.11□□□□□ -2.07
NUP98-218ENST00000530516 COL4A4P53420 1690 aaPredicted RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 ATP6AP2A0A1C7CYW4 349 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 ZSCAN5CA6NGD5 496 aaPredicted RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 NEDD8-MDP1E9PL57 170 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 M0R296 226 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 EIF5BO60841 1220 aaKnown RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 CSO75390 466 aaKnown RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 CSDE1O75534 798 aaKnown RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 LETM1O95202 739 aaPredicted RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 LYNP07948 512 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 SUPT20HL2P0C7V6 817 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 GLRA1P23415 457 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 RPL27P61353 136 aaKnown RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 SLC17A1Q14916 467 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 ZNF79Q15937 498 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 IQCCQ4KMZ1 466 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 REP15Q6BDI9 236 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 CAPN13Q6MZZ7 669 aaPredicted RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 CASC4Q6P4E1 433 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 METTL23Q86XA0 190 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 C4orf19Q8IY42 314 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 NHLRC2Q8NBF2 726 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 SNRNP27Q8WVK2 155 aaKnown RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 CKAP2Q8WWK9 683 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 ZIM3Q96PE6 472 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 TEX13BQ9BXU2 312 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 CXXC4Q9H2H0 198 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 MIS18AQ9NYP9 233 aa2.1□□□□□ -2.07
NUP98-218ENST00000530516 RCOR3Q9P2K3 495 aaPredicted RBP2.1□□□□□ -2.07
NUP98-218ENST00000530516 A0A087X0K7 114 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 TMCO5BA8MYB1 307 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 ZNF487B1APH4 448 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 IFIT3O14879 490 aaKnown RBP2.09□□□□□ -2.07
NUP98-218ENST00000530516 HSPA4LO95757 839 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 TNFRSF4P43489 277 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 RPL34P49207 117 aaKnown RBP2.09□□□□□ -2.07
NUP98-218ENST00000530516 CCR4P51679 360 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 HMGCS2P54868 508 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 PSMD6Q15008 389 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 ABRAXAS2Q15018 415 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 TGIF1Q15583 401 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 AGAP6Q5VW22 663 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 FAM47EQ6ZV65 393 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 CYP4V2Q6ZWL3 525 aaPredicted RBP2.09□□□□□ -2.07
NUP98-218ENST00000530516 CARNMT1Q8N4J0 409 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 SAMD12Q8N8I0 201 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 PNPLA2Q96AD5 504 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 PCED1BQ96HM7 432 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 PPP1R16AQ96I34 528 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 GBP5Q96PP8 586 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 RAB40CQ96S21 281 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 PARK7Q99497 189 aaKnown RBP2.09□□□□□ -2.07
NUP98-218ENST00000530516 C17orf62Q9BQA9 187 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 ZNF559Q9BR84 538 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 DEFB126Q9BYW3 111 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 ACPTQ9BZG2 426 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 PSORS1C1Q9UIG5 152 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 IKZF3Q9UKT9 509 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 OR1A2Q9Y585 309 aa2.09□□□□□ -2.07
NUP98-218ENST00000530516 KLF18A0A0U1RQI7 1052 aa2.08□□□□□ -2.08
NUP98-218ENST00000530516 MAGEB16A2A368 324 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms