RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 IL2P60568 153 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 KCNJ2P63252 427 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 REEP5Q00765 189 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 FOXO1Q12778 655 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 STX4Q12846 297 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 EFTUD2Q15029 972 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS11-203ENST00000529545 SLC22A10Q63ZE4 541 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 PAQR3Q6TCH7 311 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 CLNKQ7Z7G1 428 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 TMPRSS11BQ86T26 416 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 LACC1Q8IV20 430 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 P3H2Q8IVL5 708 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 ANKRD53Q8N9V6 530 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 RELL2Q8NC24 303 aaPredicted RBP8.3□□□□□ -1.08
VPS11-203ENST00000529545 OR8K3Q8NH51 312 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 MAIP1Q8WWC4 291 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
VPS11-203ENST00000529545 CCT6BQ92526 530 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 GAL3ST3Q96A11 431 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 FBXL8Q96CD0 374 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 LINGO1Q96FE5 620 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 SMIM10Q96HG1 83 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 TSNARE1Q96NA8 513 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 OR4K3Q96R72 315 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 NDNQ99608 321 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 SPNS1Q9H2V7 528 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 KLHL31Q9H511 634 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 PLEKHF2Q9H8W4 249 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 XAB2Q9HCS7 855 aaKnown RBP8.3□□□□□ -1.08
VPS11-203ENST00000529545 SPRR3Q9UBC9 169 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 COPS7AQ9UBW8 275 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 ZKSCAN5Q9Y2L8 839 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 KCNE2Q9Y6J6 123 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 MPDZO75970 2070 aa8.3□□□□□ -1.08
VPS11-203ENST00000529545 JMJD1CQ15652 2540 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 C15orf38-AP3S2A0A0A6YYH1 394 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 A0A0G2JN53 185 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 ZCWPW2A0A1B0GU75 182 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 SLC35F4A4IF30 521 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 CLCA1A8K7I4 914 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 C17orf105B2RV13 164 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 CASKO14936 926 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 ERI3O43414 337 aaKnown RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 CTNSO60931 367 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 GUCA1CO95843 209 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 EPPINO95925 133 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 ENO2P09104 434 aaPredicted RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 CCL3P10147 92 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 MLNP12872 115 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 CEACAM8P31997 349 aaPredicted RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 GPC1P35052 558 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 TIMP3P35625 211 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 DEKP35659 375 aaKnown RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 PIGAP37287 484 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 RNF4P78317 190 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 SORDQ00796 357 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 GPS1Q13098 491 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 RUNX2Q13950 521 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 SIX1Q15475 284 aaPredicted RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 TRIP13Q15645 432 aaPredicted RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 HSP90AA5PQ58FG0 334 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 NXPE4Q6UWF7 544 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 CXXC5Q7LFL8 322 aaKnown RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 CAND1Q86VP6 1230 aaKnown RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 THOC6Q86W42 341 aaKnown RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 PRIMA1Q86XR5 153 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 RNF10Q8N5U6 811 aaKnown RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 FAM47BQ8NA70 645 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 C7orf57Q8NEG2 295 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 TNIP2Q8NFZ5 429 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 TTLQ8NG68 377 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 NEIL3Q8TAT5 605 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 LINC01560Q8TB33 94 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 SLC22A8Q8TCC7 542 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 HSPBAP1Q96EW2 488 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 CAPZA3Q96KX2 299 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 BDH2Q9BUT1 245 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 ALOXE3Q9BYJ1 711 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 COPS7BQ9H9Q2 264 aaPredicted RBP8.29□□□□□ -1.08
VPS11-203ENST00000529545 ZFP64Q9NPA5 681 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 ACKR4Q9NPB9 350 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 HOMER3Q9NSC5 361 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 QPCTLQ9NXS2 382 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 VTI1BQ9UEU0 232 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 ATG4BQ9Y4P1 393 aa8.29□□□□□ -1.08
VPS11-203ENST00000529545 ZNF469Q96JG9 3925 aaPredicted RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 EEF1E1-BLOC1S5C9J1V9 151 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 H7C1Q1 480 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 EEF1E1O43324 174 aaKnown RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 DYRK3O43781 588 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 SMPD2O60906 423 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 COX7A2P14406 83 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 CD53P19397 219 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 ENDOUP21128 410 aaKnown RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 GSTM2P28161 218 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 OPRM1P35372 400 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 RPL21P46778 160 aaKnown RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 KCNJ1P48048 391 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 TRPC1P48995 793 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms