RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 METAP1P53582 386 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 SPANXN2Q5MJ10 180 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 ERAP2Q6P179 960 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 CCBE1Q6UXH8 406 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 CEACAM20Q6UY09 585 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 HORMAD2Q8N7B1 307 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 PDXPQ96GD0 296 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 TRNT1Q96Q11 434 aaKnown RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 IL4I1Q96RQ9 567 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 KCNS3Q9BQ31 491 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 HHATLQ9HCP6 504 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 MIEF1Q9NQG6 463 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 FBXL12Q9NXK8 326 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 EHD3Q9NZN3 535 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 MKLN1Q9UL63 735 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 RBMX2Q9Y388 322 aaKnown RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 MUC22E2RYF6 1773 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 TLR4O00206 839 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 CTDSP2O14595 271 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 SNX4O95219 450 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 TBX6O95947 436 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 ADAP00813 363 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 BCHEP06276 602 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 TRIM60Q495X7 471 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 SAXO2Q658L1 398 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 TNFAIP8L2Q6P589 184 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 SPATC1Q76KD6 591 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 WDR53Q7Z5U6 358 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 GPR65Q8IYL9 337 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 ADGRF3Q8IZF5 1079 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 CELF2-AS1Q8N7Q2 184 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF557Q8N988 423 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 SLC38A5Q8WUX1 472 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 NEURL3Q96EH8 262 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 IL17FQ96PD4 163 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 CTRCQ99895 268 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 NLNQ9BYT8 704 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 A4GALTQ9NPC4 353 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 NDOR1Q9UHB4 597 aa11.1□□□□□ -0.63
LINC01001-201ENST00000526704 A0A075B6Q4 140 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PNMA8CA0A1B0GUJ8 204 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 ASNA1O43681 348 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 FGF18O76093 207 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SOX14O95416 240 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SCG5P05408 212 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 OSMP13725 252 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SOX3P41225 446 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SNRPGP62308 76 aaKnown RBP11.09□□□□□ -0.63
LINC01001-201ENST00000526704 RHAGQ02094 409 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 TLE2Q04725 743 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF77Q15935 545 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 TRMT11Q7Z4G4 463 aaKnown RBP11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SLC9B2Q86UD5 537 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF547Q8IVP9 402 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 CACTIN-AS1Q8N1I8 211 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 TMEM19Q96HH6 336 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SLC6A18Q96N87 628 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 CFHR5Q9BXR6 569 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF717Q9BY31 904 aaPredicted RBP11.09□□□□□ -0.63
LINC01001-201ENST00000526704 UCK2Q9BZX2 261 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 HOXD1Q9GZZ0 328 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 NUAK2Q9H093 628 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SMURF1Q9HCE7 757 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 TDP1Q9NUW8 608 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 DNAJC27Q9NZQ0 273 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 CLEC2DQ9UHP7 191 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PLAGL1Q9UM63 463 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 COL4A3Q01955 1670 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 LOC110117498-PIK3R3F6TDL0 507 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PSMD11O00231 422 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PLPP1O14494 284 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 DYRK3O43781 588 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 CSO75390 466 aaKnown RBP11.09□□□□□ -0.63
LINC01001-201ENST00000526704 GNRH1P01148 92 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
LINC01001-201ENST00000526704 WEE1P30291 646 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PPM1AP35813 382 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 NNMTP40261 264 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
LINC01001-201ENST00000526704 TMEM201Q5SNT2 666 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PRAMEF14Q5SWL7 426 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PRAMEF13Q5VWM6 474 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SLX4IPQ5VYV7 408 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 TMIGD1Q6UXZ0 262 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 PIK3R3Q92569 461 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 DHRS1Q96LJ7 313 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 ABCG4Q9H172 646 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 SIAEQ9HAT2 523 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 C14orf119Q9NWQ9 140 aa11.09□□□□□ -0.63
LINC01001-201ENST00000526704 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
LINC01001-201ENST00000526704 H3BQ06 376 aaPredicted RBP11.08□□□□□ -0.64
LINC01001-201ENST00000526704 KPNA3O00505 521 aaPredicted RBP11.08□□□□□ -0.64
LINC01001-201ENST00000526704 B4GALT2O60909 372 aa11.08□□□□□ -0.64
LINC01001-201ENST00000526704 MFN2O95140 757 aa11.08□□□□□ -0.64
LINC01001-201ENST00000526704 CKMT1AP12532 417 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms