RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 WDR83Q9BRX9 315 aaKnown RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 ALOXE3Q9BYJ1 711 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 TSGA10Q9BZW7 698 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 EIF2B3Q9NR50 452 aaKnown RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 ZNF629Q9UEG4 869 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 BOKQ9UMX3 212 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 MRPS33Q9Y291 106 aaKnown RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 DSCAMO60469 2012 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 AP3B1O00203 1094 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 ACSL3O95573 720 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 SMIM10L1P0DMW3 83 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 HNRNPH1P31943 449 aaKnown RBP10.69□□□□□ -0.7
SDCBP-211ENST00000523441 AHRP35869 848 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 HSD17B7P56937 341 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 RAB38P57729 211 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 REEP5Q00765 189 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 FBXL19-AS1Q494R0 122 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 C10orf62Q5T681 223 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-211ENST00000523441 DUPD1Q68J44 220 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.69□□□□□ -0.7
SDCBP-211ENST00000523441 SYCE1Q8N0S2 351 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 DAZLQ92904 295 aaKnown RBP10.69□□□□□ -0.7
SDCBP-211ENST00000523441 PIK3IP1Q96FE7 263 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 SMIM10Q96HG1 83 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 SGCZQ96LD1 299 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 GAL3ST4Q96RP7 486 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 COPS7BQ9H9Q2 264 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-211ENST00000523441 ZFP64Q9NPA5 681 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 IARS2Q9NSE4 1012 aaKnown RBP10.69□□□□□ -0.7
SDCBP-211ENST00000523441 GALNT8Q9NY28 637 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 COPS7AQ9UBW8 275 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 CLDN16Q9Y5I7 305 aa10.69□□□□□ -0.7
SDCBP-211ENST00000523441 MBD3L4A6NDZ8 208 aaPredicted RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 MBD3L5A6NJ08 208 aaPredicted RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 LRRC3CA6NJW4 275 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 SNPHO15079 494 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 SH3BGRLO75368 114 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 ERN1O75460 977 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 ETHE1O95571 254 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 CNOT4O95628 575 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 BMP7P18075 431 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 CTSSP25774 331 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 CDKN2DP55273 166 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 STXBP1P61764 594 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 FOXF2Q12947 444 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 HYAL4Q2M3T9 481 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 HSP90AA5PQ58FG0 334 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 RBM20Q5T481 1227 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 ANKRD22Q5VYY1 191 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 UGT3A1Q6NUS8 523 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 NXPE4Q6UWF7 544 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 RAD9BQ6WBX8 426 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 TMEM64Q6YI46 380 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 THOC6Q86W42 341 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 OR4N5Q8IXE1 308 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 KLHDC8AQ8IYD2 350 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 RASGEF1CQ8N431 466 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 MORN4Q8NDC4 146 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 OR10G3Q8NGC4 313 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 OR5L2Q8NGL0 311 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 OR56A3Q8NH54 315 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 OR14A16Q8NHC5 309 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 GAL3ST3Q96A11 431 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 CALR3Q96L12 384 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 TIMP4Q99727 224 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 DESI2Q9BSY9 194 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 DOHHQ9BU89 302 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 TRIM54Q9BYV2 358 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 KLHL42Q9P2K6 505 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 FBXO5Q9UKT4 447 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 PPIEQ9UNP9 301 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 SLC22A14Q9Y267 594 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 MAD1L1Q9Y6D9 718 aa10.68□□□□□ -0.7
SDCBP-211ENST00000523441 ANK3Q12955 4377 aaKnown RBP10.68□□□□□ -0.7
SDCBP-211ENST00000523441 AHRRA9YTQ3 701 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 SERPINA6P08185 405 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 TMIGD3P0DMS9 266 aaPredicted RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 OPRM1P35372 400 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 TIMP3P35625 211 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 MSH2P43246 934 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 LIM2P55344 173 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 SORDQ00796 357 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 SRYQ05066 204 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 CRYZQ08257 329 aaKnown RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 SP140Q13342 867 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 DCST1Q5T197 706 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 BICRALQ6AI39 1079 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 ADGRD1Q6QNK2 874 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 CAPN12Q6ZSI9 719 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 ZNF595Q8IYB9 648 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 GCNT2Q8N0V5 402 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 C9orf106Q8NAJ2 232 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 GABPB2Q8TAK5 448 aaPredicted RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 SLC22A8Q8TCC7 542 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 DIO2Q92813 273 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 PIGTQ969N2 578 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 PPWD1Q96BP3 646 aaKnown RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 ZC3HAV1LQ96H79 300 aaKnown RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms