RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ETFAP13804 333 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 HNRNPA2B1P22626 353 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 EEF1B2P24534 225 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 RPL10P27635 214 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 SOX9P48436 509 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 PXNP49023 591 aaPredicted RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 HMGA2P52926 109 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 TMBIM6P55061 237 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 PCBP3P57721 371 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 SMIM11AP58511 58 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 STXBP1P61764 594 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 VLDLRP98155 873 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 MC1RQ01726 317 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 KCNC4Q03721 635 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 SLC9A5Q14940 896 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 KIR2DS3Q14952 304 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 PLCL1Q15111 1095 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 SLC5A12Q1EHB4 618 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 MPEG1Q2M385 716 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 IQCCQ4KMZ1 466 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 ANGPTL8Q6UXH0 198 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 TMEM64Q6YI46 380 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 SAMD14Q8IZD0 417 aaPredicted RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 MFSD9Q8NBP5 474 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 CHDHQ8NE62 594 aaPredicted RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 OR52E1Q8NGJ3 308 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 FAM174AQ8TBP5 190 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 RNF217Q8TC41 542 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 SFXN5Q8TD22 340 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 TPD52L3Q96J77 140 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 PITX2Q99697 317 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 DOK1Q99704 481 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 BCL7BQ9BQE9 202 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 SPATA5L1Q9BVQ7 753 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 CXorf21Q9HAI6 301 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 SEMA3GQ9NS98 782 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 KRT84Q9NSB2 600 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 GPATCH2Q9NW75 528 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 CUEDC1Q9NWM3 386 aaPredicted RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 TRNAU1APQ9NX07 287 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 LYARQ9NX58 379 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 SCN3BQ9NY72 215 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 PDP1Q9P0J1 537 aaPredicted RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 KIF17Q9P2E2 1029 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 ABCG2Q9UNQ0 655 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 KCNK6Q9Y257 313 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 FAM32AQ9Y421 112 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 PCDHGB1Q9Y5G3 927 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 SNX5Q9Y5X3 404 aa9.46□□□□□ -0.89
SPARC-202ENST00000520687 GCN1Q92616 2671 aaKnown RBP9.46□□□□□ -0.89
SPARC-202ENST00000520687 MYOCOSA0A1B0GUC4 107 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 TBX6O95947 436 aaPredicted RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 EGFP01133 1207 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 JUNDP17535 347 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 NELFEP18615 380 aaKnown RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 DCKP27707 260 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 NTSP30990 170 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 AKT2P31751 481 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 SOAT1P35610 550 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 SSR2P43308 183 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 IST1P53990 364 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 CDH15P55291 814 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 RPS15AP62244 130 aaKnown RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 HPCAP84074 193 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 CLCA4Q14CN2 919 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 SPDYE7PQ495Y7 208 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 PRAMEF8Q5VWM4 474 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 PRAMEF7Q5VXH5 474 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 KIAA1614Q5VZ46 1190 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 KCTD8Q6ZWB6 473 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 ADCK2Q7Z695 626 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 VTCN1Q7Z7D3 282 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 TMEM179BQ7Z7N9 219 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 AMIGO1Q86WK6 493 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 RNF130Q86XS8 419 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 ADGRF3Q8IZF5 1079 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 C2orf73Q8N5S3 287 aaPredicted RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 ATG16L2Q8NAA4 619 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 OR2L5Q8NG80 312 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 OR2L3Q8NG85 312 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 SPPL2AQ8TCT8 520 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 GIPC3Q8TF64 312 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 IPCEF1Q8WWN9 437 aaPredicted RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 CIDECQ96AQ7 238 aaPredicted RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 ZNF300Q96RE9 604 aaPredicted RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 ZNF607Q96SK3 696 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 GABARAPL3Q9BY60 117 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 TWSG1Q9GZX9 223 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 ADNPQ9H2P0 1102 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 POLR1BQ9H9Y6 1135 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 MOSPD1Q9UJG1 213 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 UTS2RQ9UKP6 389 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 PSME2Q9UL46 239 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 NDRG4Q9ULP0 352 aaKnown RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 NAALAD2Q9Y3Q0 740 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 PCDHGA8Q9Y5G5 932 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 MAGED1Q9Y5V3 778 aaPredicted RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 CFAP20Q9Y6A4 193 aaKnown RBP9.46□□□□□ -0.9
SPARC-202ENST00000520687 PIAS3Q9Y6X2 628 aa9.46□□□□□ -0.9
SPARC-202ENST00000520687 COL4A2P08572 1712 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms