RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TTYH2Q9BSA4 534 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 RTFDC1Q9BY42 306 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 CARD9Q9H257 536 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 CHODLQ9H9P2 273 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 EML4Q9HC35 981 aaKnown RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 IL1RAPL2Q9NP60 686 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TIGARQ9NQ88 270 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 STARD7Q9NQZ5 370 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ASAH2Q9NR71 780 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 MPP6Q9NZW5 540 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 CWC15Q9P013 229 aaKnown RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 KCNN3Q9UGI6 736 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 LCMT1Q9UIC8 334 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 PRPF19Q9UMS4 504 aaKnown RBP-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 MAU2Q9Y6X3 613 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TENM2Q9NT68 2774 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 ARFGEF3Q5TH69 2177 aa-1.41□□□□□ -2.64
RNU6-542P-201ENST00000516405 TECTAO75443 2155 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 IGHV3OR16-12A0A075B7B8 117 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 IGKV1-9A0A0C4DH69 117 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 A0A0J9YXY3 114 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 PSMB11A5LHX3 300 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 HEPACAM2A8MVW5 462 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 ALG1L2C9J202 215 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 H3BQ06 376 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 CCL24O00175 119 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 PEX12O00623 359 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 OR7A17O14581 309 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 LDLRAD4O15165 306 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 NDUFS4O43181 175 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 OR9G9P0C7N8 305 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 SMIM18P0DKX4 95 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 NR2F1P10589 423 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 TCP1P17987 556 aaKnown RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 TRIM21P19474 475 aaKnown RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 EEF1DP29692 281 aaKnown RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 RPL9P32969 192 aaKnown RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 ARL1P40616 181 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 NSFP46459 744 aaKnown RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 PIP4K2AP48426 406 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 SLC1A6P48664 564 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 NEK2P51955 445 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 NAGLUP54802 743 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 RPS11P62280 158 aaKnown RBP eCLIP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 ELAVL3Q14576 367 aaKnown RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 IHHQ14623 411 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 DCAF4L1Q3SXM0 396 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 EOGTQ5NDL2 527 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 SULT1C3Q6IMI6 304 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 DCLRE1AQ6PJP8 1040 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 GDPD3Q7L5L3 318 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 HSD17B13Q7Z5P4 300 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 MMD2Q8IY49 270 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 TRPV3Q8NET8 790 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 SYNPRQ8TBG9 265 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 CCDC107Q8WV48 283 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 CACNG8Q8WXS5 425 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZNF625Q96I27 306 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 KLHL15Q96M94 604 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 CDCA3Q99618 268 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 FUT8Q9BYC5 575 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 RACGAP1Q9H0H5 632 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 TAOK3Q9H2K8 898 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 FNDC4Q9H6D8 234 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 ABCC13Q9NSE7 274 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 TBC1D13Q9NVG8 400 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 DPM3Q9P2X0 92 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 CNOT8Q9UFF9 292 aaKnown RBP-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 CHKBQ9Y259 395 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 ETV7Q9Y603 341 aa-1.42□□□□□ -2.64
RNU6-542P-201ENST00000516405 ATG2BQ96BY7 2078 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZNF724A8MTY0 619 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 LGALS9O00182 355 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 AP3D1O14617 1153 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 ARPC2O15144 300 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 HTATSF1O43719 755 aaKnown RBP-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 OR10H2O60403 315 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 MBD4O95243 580 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 SLC2A10O95528 541 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 CD27P26842 260 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 UGT1A3P35503 534 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 TNFSF9P41273 254 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 MSH2P43246 934 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 TRAPPC10P48553 1259 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 VCPP55072 806 aaKnown RBP-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 UCP2P55851 309 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 SNRPEP62304 92 aaKnown RBP-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZNF154Q13106 437 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 ARHGAP29Q52LW3 1261 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 ZRANB3Q5FWF4 1079 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 INTS11Q5TA45 600 aaKnown RBP-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 TMEM225Q6GV28 225 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 PPP4R4Q6NUP7 873 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 WDR74Q6RFH5 385 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 ARSKQ6UWY0 536 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 ABRAXAS1Q6UWZ7 409 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 LGI2Q8N0V4 545 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 SAMD12Q8N8I0 201 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 TNIP2Q8NFZ5 429 aa-1.43□□□□□ -2.64
RNU6-542P-201ENST00000516405 OR6Y1Q8NGX8 325 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms