RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	NXPE2	Q96DL1	559 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TRIM44	Q96DX7	344 aa	Predicted RBP	3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GPA33	Q99795	319 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	COQ7	Q99807	217 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ASCL2	Q99929	193 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	DPEP3	Q9H4B8	488 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	DCLRE1B	Q9H816	532 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RNF186	Q9NXI6	227 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CNOT2	Q9NZN8	540 aa	Known RBP	3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PSORS1C1	Q9UIG5	152 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PLA2G4C	Q9UP65	541 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ETV7	Q9Y603	341 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	IQGAP3	Q86VI3	1631 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	EIF2AK4	Q9P2K8	1649 aa	Known RBP	3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ABCC1	P33527	1531 aa		3.03	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RTEL1-TNFRSF6B	F6WH68	1400 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	DISP3	Q9P2K9	1392 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	NOTCH4	Q99466	2003 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	TRPM1	Q7Z4N2	1603 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267		A0A087WUV0	522 aa	Predicted RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267		A0A087WYN8	130 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267		A0A1B0GWJ7	208 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	P2RY10	O00398	339 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CYTIP	O60759	359 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	GMNN	O75496	209 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	AKR7A3	O95154	331 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	PTBP3	O95758	552 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	IFNB1	P01574	187 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CRYAA	P02489	173 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	KRT8	P05787	483 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	GPI	P06744	558 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	PRKAR1A	P10644	381 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	RALA	P11233	206 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	AADAC	P22760	399 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	ACKR3	P25106	362 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	PKLR	P30613	574 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	OR1D2	P34982	312 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	PITPNB	P48739	271 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	DCDC1	P59894	354 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	HILS1	P60008	231 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	PMP22	Q01453	160 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CNTN1	Q12860	1018 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	SPP2	Q13103	211 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	SNX1	Q13596	522 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	SQLE	Q14534	574 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	KARS	Q15046	597 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	TEAD2	Q15562	447 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CARTPT	Q16568	116 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	WSCD2	Q2TBF2	565 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	WDR38	Q5JTN6	314 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CEP85L	Q5SZL2	805 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	IL23R	Q5VWK5	629 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CES4A	Q5XG92	561 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	HIST2H2AA3	Q6FI13	130 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	FAM159A	Q6UWV7	190 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	ISLR2	Q6UXK2	745 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CEACAM20	Q6UY09	585 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	RFPL4B	Q6ZWI9	263 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	LSMEM2	Q8N112	164 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	ELMOD1	Q8N336	334 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	WDSUB1	Q8N9V3	476 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	MINDY2	Q8NBR6	621 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	GMCL1P1	Q8NEA9	526 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	KLHDC9	Q8NEP7	349 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	OR6M1	Q8NGM8	313 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	OR13C5	Q8NGS8	318 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	APOBEC4	Q8WW27	367 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	TM9SF4	Q92544	642 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CASP10	Q92851	521 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	RAB39B	Q96DA2	213 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	BPIFA2	Q96DR5	249 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	FBXO17	Q96EF6	278 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	GIMAP5	Q96F15	307 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	VPS39	Q96JC1	886 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	C10orf90	Q96M02	699 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	TAAR6	Q96RI8	345 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	PCDHB18P	Q96TA0	734 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	IL12RB2	Q99665	862 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	NKX3-1	Q99801	234 aa	Predicted RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	TDRD1	Q9BXT4	1180 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	CCSER1	Q9C0I3	900 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	SIRPD	Q9H106	197 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	MTIF3	Q9H2K0	278 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	TSPY26P	Q9H489	355 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	BICC1	Q9H694	974 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	DDX28	Q9NUL7	540 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	INTS9	Q9NV88	658 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	HACD3	Q9P035	362 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	TAAR2	Q9P1P5	351 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	ZNF319	Q9P2F9	582 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	PILRA	Q9UKJ1	303 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	SELENOK	Q9Y6D0	94 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	ATP7A	Q04656	1500 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	A2M	P01023	1474 aa		3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	SMG6	Q86US8	1419 aa	Known RBP	3.02	□□□□□ -1.93
CALCOCO2-223	ENST00000514267	RNF123	Q5XPI4	1314 aa		3.01	□□□□□ -1.93
CALCOCO2-223	ENST00000514267		A0A087WZY1	265 aa		3.01	□□□□□ -1.93
CALCOCO2-223	ENST00000514267		A0A0U1RRA0	63 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms