RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 APBB3O95704 486 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 AIFM1O95831 613 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 ZNF888P0CJ79 500 aaPredicted RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 POU2F1P14859 743 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 UQCRC2P22695 453 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 BMP8BP34820 402 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 GPR19Q15760 415 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 DEFB134Q4QY38 66 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 Q6ZPB1 254 aaPredicted RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 SVOPLQ8N434 492 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 DENND6BQ8NEG7 585 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 TSTD1Q8NFU3 115 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 XAGE5Q8WWM1 108 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 MTERF3Q96E29 417 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 PHF7Q9BWX1 381 aaPredicted RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 DDX31Q9H8H2 851 aaKnown RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 SIRT3Q9NTG7 399 aaPredicted RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 ZCCHC3Q9NUD5 404 aaKnown RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 TMEM74BQ9NUR3 256 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 OR6C2Q9NZP2 312 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 TSC22D4Q9Y3Q8 395 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 P2RX6O15547 441 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 OR12D1P0DN82 309 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 ATP5A1P25705 553 aaKnown RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 CCT3P49368 545 aaKnown RBP14.11□□□□□ -0.15
PHF3-209ENST00000509330 ARHGDIAP52565 204 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 CDH12P55289 794 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 ID2Q02363 134 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 DUSP7Q16829 419 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 FRMPD2BQ6IN97 320 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 VN1R4Q7Z5H5 301 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 CNIH3Q8TBE1 160 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 C7orf34Q96L11 122 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 MAPKAP1Q9BPZ7 522 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 MIR1-1HGQ9H1L0 117 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 TRPV5Q9NQA5 729 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 PRDM7Q9NQW5 492 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 ORC6Q9Y5N6 252 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 SPTBP11277 2137 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 WDFY4Q6ZS81 3184 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 LOC105369274A0A096LPK9 316 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 LOC102723532A0A0G2JNH3 316 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 C5orf58C9J3I9 102 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 KRT75O95678 551 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 CTSEP14091 401 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 UGT2B7P16662 529 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 SELENOWP63302 87 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 IL5RAQ01344 420 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 SPIBQ01892 262 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 TEAD4Q15561 434 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 DEFB110Q30KQ9 67 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 TMEM107Q6UX40 140 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 USP51Q70EK9 711 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 TSEN54Q7Z6J9 526 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 HIPK1Q86Z02 1210 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 C8orf59Q8N0T1 100 aaPredicted RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 OR4N4Q8N0Y3 316 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 SLC37A2Q8TED4 501 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 TMEM19Q96HH6 336 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 KCNC2Q96PR1 638 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 SERHL2Q9H4I8 314 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 TM9SF3Q9HD45 589 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 CD320Q9NPF0 282 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 IFT80Q9P2H3 777 aaPredicted RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 FRYLO94915 3013 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 ABCA7Q8IZY2 2146 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 LOC100130705A0A1B0GUX0 176 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 STK25O00506 426 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 CHRNB1P11230 501 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 NR1H2P55055 460 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 SYPL1Q16563 259 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 CTU2Q2VPK5 515 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 SHQ1Q6PI26 577 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 Q7L0L9 218 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 FAM46DQ8NEK8 389 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 VANGL1Q8TAA9 524 aaPredicted RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 SLC38A5Q8WUX1 472 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 OR5P2Q8WZ92 322 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 UBE2FQ969M7 185 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 CNRIP1Q96F85 164 aaPredicted RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 ZBED6CLQ96FA7 236 aaPredicted RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 SLC35C2Q9NQQ7 365 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 NDUFAF4Q9P032 175 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 USP36Q9P275 1121 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 AP1M2Q9Y6Q5 423 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 PTGES3LE9PB15 166 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 FAM227AF5H4B4 570 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 VILLO15195 856 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 KCNJ13O60928 360 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 TNFP01375 233 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 SEMG1P04279 462 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 LSSP48449 732 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 CLCN2P51788 898 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 HNRNPFP52597 415 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 PCBP4P57723 403 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 SFSWAPQ12872 951 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 EIF2B5Q13144 721 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 RAPSNQ13702 412 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 LASP1Q14847 261 aaKnown RBP14.1□□□□□ -0.15
PHF3-209ENST00000509330 LTB4RQ15722 352 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms