RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ACADMP11310 421 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HLA-EP13747 358 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 EPORP19235 508 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GSTM3P21266 225 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 IDSP22304 550 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCR7P32248 378 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GRK5P34947 590 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CNR2P34972 360 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HNF1BP35680 557 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 RPS19P39019 145 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 LIMS1P48059 325 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 RFX2P48378 723 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ANXA11P50995 505 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 WDR5P61964 334 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNRPD1P62314 119 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 POLR2LP62875 67 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CYP4F2P78329 520 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM189BP81408 668 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 DAB2P98082 770 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ALDH6A1Q02252 535 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF763Q0D2J5 394 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 COX10Q12887 443 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HYAL2Q12891 473 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TARDBPQ13148 414 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 MAB21L1Q13394 359 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TNK1Q13470 666 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HEPACAMQ14CZ8 416 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 VEPH1Q14D04 833 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ARHGEF6Q15052 776 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR19Q15760 415 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SSX1Q16384 188 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 DUSP6Q16828 381 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GLYR1Q49A26 553 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 PYDC2Q56P42 97 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 C3orf38Q5JPI3 329 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 DGKKQ5KSL6 1271 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 MFSD4BQ5TF39 518 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HACD4Q5VWC8 232 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NXNL2Q5VZ03 156 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HIST2H2AA3Q6FI13 130 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 REEP3Q6NUK4 255 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CXCL17Q6UXB2 119 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 LINC00114Q6XXX2 140 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SPATC1Q76KD6 591 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF438Q7Z4V0 828 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SAPCD2Q86UD0 394 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 C11orf74Q86VG3 221 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 THOC6Q86W42 341 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF280BQ86YH2 543 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCDC28AQ8IWP9 274 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC22A15Q8IZD6 547 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CLECL1Q8IZS7 167 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC34A3Q8N130 599 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GJD3Q8N144 294 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NAGSQ8N159 534 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM109AQ8N4B1 249 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CLDN19Q8N6F1 224 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NANOGP1Q8N7R0 232 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 Q8N9G6 341 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 AQP11Q8NBQ7 271 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 PLA2G15Q8NCC3 412 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 WDR20Q8TBZ3 569 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR152Q8TDT2 470 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR151Q8TDV0 419 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 UBASH3BQ8TF42 649 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ASZ1Q8WWH4 475 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 BHMTQ93088 406 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 PPCDCQ96CD2 204 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CHFRQ96EP1 664 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 DIRAS2Q96HU8 199 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 RNF170Q96K19 258 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 EGLN2Q96KS0 407 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR5M11Q96RB7 305 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 MCCC1Q96RQ3 725 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 DPH2Q9BQC3 489 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM175Q9BSA9 504 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 EFCAB11Q9BUY7 163 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 EBPLQ9BY08 206 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 MRPL9Q9BYD2 267 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NLNQ9BYT8 704 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 POLR2J2Q9GZM3 115 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 MKRN2Q9H000 416 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 IRF2BPLQ9H1B7 796 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 MIR1-1HGQ9H1L0 117 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ELAC1Q9H777 363 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NT5DC2Q9H857 520 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 FOLH1BQ9HBA9 442 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SGK2Q9HBY8 427 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC25A19Q9HC21 320 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HHATLQ9HCP6 504 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 AMBNQ9NP70 447 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 PAK6Q9NQU5 681 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNTG1Q9NSN8 517 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ACER3Q9NUN7 267 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ABCB8Q9NUT2 735 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ACOXLQ9NUZ1 547 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 QPCTLQ9NXS2 382 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 RNF181Q9P0P0 153 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM8A1Q9UBU6 413 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CPA4Q9UI42 421 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms