RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 HNRNPFP52597 415 aaKnown RBP2.85□□□□□ -1.95
LSM6-205ENST00000507449 KCNK10P57789 538 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 SRP54P61011 504 aaKnown RBP2.85□□□□□ -1.95
LSM6-205ENST00000507449 RPL27P61353 136 aaKnown RBP2.85□□□□□ -1.95
LSM6-205ENST00000507449 KIAA0141Q14154 515 aaPredicted RBP2.85□□□□□ -1.95
LSM6-205ENST00000507449 KRT31Q15323 416 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 UPP1Q16831 310 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 RFTN2Q52LD8 501 aaPredicted RBP2.85□□□□□ -1.95
LSM6-205ENST00000507449 C2CD6Q53TS8 623 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 DCAF12Q5T6F0 453 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 ETFRF1Q6IPR1 90 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 DLEU7Q6UYE1 221 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 ADAMTSL2Q86TH1 951 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 ZNF619Q8N2I2 560 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 METTL4Q8N3J2 472 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 GPATCH11Q8N954 259 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 TMEM185AQ8NFB2 350 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 NEK11Q8NG66 645 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 OR52B6Q8NGF0 335 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 EXOC6Q8TAG9 804 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 KIAA1524Q8TCG1 905 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 UBE2Q2Q8WVN8 375 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 LINC00479Q96M42 142 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 GPR137Q96N19 417 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 RAB40CQ96S21 281 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 MCRIP2Q9BUT9 160 aaKnown RBP2.85□□□□□ -1.95
LSM6-205ENST00000507449 GANQ9H2C0 597 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 PLEKHA3Q9HB20 300 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 ANO10Q9NW15 660 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 NUDT4Q9NZJ9 180 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 TRIM10Q9UDY6 481 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 IL19Q9UHD0 177 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 NPC1L1Q9UHC9 1359 aa2.85□□□□□ -1.95
LSM6-205ENST00000507449 KIF26BQ2KJY2 2108 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 TRBV2A0A0J9YWF9 115 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 MACROD2A1Z1Q3 448 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 H7C423 109 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 CCSO14618 274 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 TFECO14948 347 aaPredicted RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 INPP4BO15327 924 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 HTATSF1O43719 755 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 PRDM1O75626 825 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 OR6B1O95007 311 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 SLC4A1P02730 911 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 LYNP07948 512 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 FHP07954 510 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 GSTA2P09210 222 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 TPBGLP0DKB5 382 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 FERP16591 822 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 FCARP24071 287 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 TNFRSF4P43489 277 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 MTIF2P46199 727 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 ZFP36L2P47974 494 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 LIMK2P53671 638 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 CRYBA2P53672 197 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 ERVK-16P61578 105 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 RPS27AP62979 156 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 RBBP4Q09028 425 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 HSPA14Q0VDF9 509 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 ITPK1Q13572 414 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 TSTA3Q13630 321 aaPredicted RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 GCKRQ14397 625 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 ZNF146Q15072 292 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 ZNF730Q6ZMV8 503 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 C17orf64Q86WR6 236 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 PARP8Q8N3A8 854 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 CHCHD4Q8N4Q1 142 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 RELL2Q8NC24 303 aaPredicted RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 ZNRF1Q8ND25 227 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 OR6F1Q8NGZ6 308 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 MIPOL1Q8TD10 442 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 SLC13A3Q8WWT9 602 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 MRPL24Q96A35 216 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 PNPLA2Q96AD5 504 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 NABP1Q96AH0 204 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 ALKBH3Q96Q83 286 aaPredicted RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 RUFY1Q96T51 708 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 NAP1L3Q99457 506 aaPredicted RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 LGMNQ99538 433 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 CCDC28BQ9BUN5 200 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 FUNDC2Q9BWH2 189 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 SLC26A1Q9H2B4 701 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 MARCH7Q9H992 704 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 KCNK13Q9HB14 408 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 SYTL2Q9HCH5 934 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 ACOXLQ9NUZ1 547 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 NDUFA13Q9P0J0 144 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 NARFQ9UHQ1 456 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 TEKT2Q9UIF3 430 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 MOSPD1Q9UJG1 213 aa2.84□□□□□ -1.95
LSM6-205ENST00000507449 ERRFI1Q9UJM3 462 aaPredicted RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 MRTO4Q9UKD2 239 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 DIMT1Q9UNQ2 313 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 RPH3AQ9Y2J0 694 aaPredicted RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 STRAPQ9Y3F4 350 aaKnown RBP2.84□□□□□ -1.95
LSM6-205ENST00000507449 RPGRIP1LQ68CZ1 1315 aa2.84□□□□□ -1.96
LSM6-205ENST00000507449 IGHV3OR16-10A0A075B7F0 116 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 A0A0U1RRA0 63 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 SYCE3A1L190 88 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms