RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 LIPKQ5VXJ0 399 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 LIPJQ5W064 366 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 ARHGAP17Q68EM7 881 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 SPSB3Q6PJ21 355 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 C17orf64Q86WR6 236 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 CD99L2Q8TCZ2 262 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 GIMAP5Q96F15 307 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 THOC3Q96J01 351 aaKnown RBP5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 TDRD1Q9BXT4 1180 aaKnown RBP5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 SIX2Q9NPC8 291 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 ZNF624Q9P2J8 865 aaPredicted RBP5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 ATG4BQ9Y4P1 393 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 NPC1L1Q9UHC9 1359 aa5.52□□□□□ -1.53
AP001960.1-201ENST00000506494 P2RX6O15547 441 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 MFN2O95140 757 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 EML2O95834 649 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 CALCAP01258 141 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 CRYAAP02489 173 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 PAX1P15863 534 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 HNRNPA2B1P22626 353 aaKnown RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 MARK3P27448 753 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 FEN1P39748 380 aaKnown RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 CDKL1Q00532 357 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 MFGE8Q08431 387 aaPredicted RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 ZKSCAN8Q15776 578 aaPredicted RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 USH1GQ495M9 461 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 FAM106AQ4KMX7 169 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 C9orf139Q6ZV77 190 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 SH2D5Q6ZV89 423 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 TRPT1Q86TN4 253 aaKnown RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 CUZD1Q86UP6 607 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 OR4D10Q8NGI6 311 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 GIPC3Q8TF64 312 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 PINX1Q96BK5 328 aaKnown RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 LURAP1Q96LR2 239 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 SLC52A3Q9NQ40 469 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 GDF3Q9NR23 364 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 MED17Q9NVC6 651 aa5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 TECRQ9NZ01 308 aaKnown RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 ZNF490Q9ULM2 529 aaPredicted RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 DDX49Q9Y6V7 483 aaKnown RBP5.51□□□□□ -1.53
AP001960.1-201ENST00000506494 hCG_38984A0A1B0GV85 526 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 IKBKBO14920 756 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 LANCL1O43813 399 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 FGF17O60258 216 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 CSO75390 466 aaKnown RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 CDC123O75794 336 aaPredicted RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 CLPTM1O96005 669 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 CA3P07451 260 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 TPM2P07951 284 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 MBL2P11226 248 aaPredicted RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 GIFP27352 417 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 GBX2P52951 348 aaPredicted RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 BTG1P62324 171 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 SLC36A3Q495N2 470 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 NADK2Q4G0N4 442 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 LRRC23Q53EV4 343 aaPredicted RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 C1orf189Q5VU69 101 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 SLC25A47Q6Q0C1 308 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 Q71RC1 249 aaPredicted RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 SLC22A16Q86VW1 577 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 UNC5CLQ8IV45 518 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 PARP8Q8N3A8 854 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 FADS6Q8N9I5 356 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 MLKLQ8NB16 471 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 GOLGA5Q8TBA6 731 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 TCP11Q8WWU5 503 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 TMEM37Q8WXS4 190 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 SENP5Q96HI0 755 aaPredicted RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 PCED1BQ96HM7 432 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 DEFB118Q96PH6 123 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 MEIS3Q99687 375 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 FAM124BQ9H5Z6 455 aaPredicted RBP5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 LHX3Q9UBR4 397 aa5.5□□□□□ -1.53
AP001960.1-201ENST00000506494 A0A0U1RQV5 110 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 TRIM49BA6NDI0 452 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 PDXKO00764 312 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 SMAD6O43541 496 aaKnown RBP5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 KIAA0513O60268 411 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 TRMUO75648 421 aaKnown RBP5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 PRAMEF12O95522 483 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 FGF19O95750 216 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 PAK4O96013 591 aaPredicted RBP5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 VTNP04004 478 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 GP9P14770 177 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 IL4RP24394 825 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 ACTR1AP61163 376 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 ADPRMQ3LIE5 342 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 KIAA1644Q3SXP7 199 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 CEP55Q53EZ4 464 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 LRRC8BQ6P9F7 803 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 ZNF790Q6PG37 636 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 ASRGL1Q7L266 308 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 ERASQ7Z444 233 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 CACUL1Q86Y37 369 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 STKLD1Q8NE28 680 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 KLHDC9Q8NEP7 349 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 OR2T11Q8NH01 316 aa5.49□□□□□ -1.53
AP001960.1-201ENST00000506494 ZNRF4Q8WWF5 429 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms