RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GPX3P22352 226 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 PRELPP51888 382 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 SLC8A3P57103 927 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 DSCR10P59022 87 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 MFGE8Q08431 387 aaPredicted RBP3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 LCP2Q13094 533 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 STXBP2Q15833 593 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 TCTEX1D4Q5JR98 221 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 ZNF730Q6ZMV8 503 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 SLC47A2Q86VL8 602 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 BANPQ8N9N5 519 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 LPCAT1Q8NF37 534 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 OR6F1Q8NGZ6 308 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 OR2L2Q8NH16 312 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 RNASE8Q8TDE3 154 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 ST7LQ8TDW4 575 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 UBTD2Q8WUN7 234 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 PCED1BQ96HM7 432 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 ANKRD27Q96NW4 1050 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 RCHY1Q96PM5 261 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 DDX50Q9BQ39 737 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 PYGO2Q9BRQ0 406 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 RAB11FIP5Q9BXF6 653 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 OCR1Q9BZK8 76 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 LRRCC1Q9C099 1032 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 ADNPQ9H2P0 1102 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 RPS10P5Q9NQ39 176 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 THYN1Q9P016 225 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 ZNF346Q9UL40 294 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 KCNK6Q9Y257 313 aa3.24□□□□□ -1.89
TOPBP1-204ENST00000505804 FGD5Q6ZNL6 1462 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 ZNF724A8MTY0 619 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 TMCO5BA8MYB1 307 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 SRRM5B3KS81 715 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 OGTO15294 1046 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 GALR3O60755 368 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 GMNNO75496 209 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 STBD1O95210 358 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 GOSR1O95249 250 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 FHP07954 510 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 HOXD4P09016 255 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 HMOX1P09601 288 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 GLRA1P23415 457 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 LMO2P25791 158 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 ZFP36L2P47974 494 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 PGFP49763 221 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 GSK3BP49841 420 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 UCP2P55851 309 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 KIAA1024LP59773 190 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 RPL27P61353 136 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 ACY1Q03154 408 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 RIGQ13278 110 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 WSCD2Q2TBF2 565 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 MUC21Q5SSG8 566 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 C9orf66Q5T8R8 295 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 SLC25A42Q86VD7 318 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 WDR49Q8IV35 697 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 UNC45BQ8IWX7 931 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 FBXW8Q8N3Y1 598 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 SFRP1Q8N474 314 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 POM121L12Q8N7R1 296 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 C4orf32Q8N8J7 132 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 ZNRF1Q8ND25 227 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 OR1B1Q8NGR6 318 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 OR4L1Q8NH43 312 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 TCP11Q8WWU5 503 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 C5orf30Q96GV9 206 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 S1PR3Q99500 378 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 AGPAT1Q99943 283 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 NUSAP1Q9BXS6 441 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 CXXC4Q9H2H0 198 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 NMUR1Q9HB89 426 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 EXOC6BQ9Y2D4 811 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 CSAG2Q9Y5P2 127 aa3.23□□□□□ -1.89
TOPBP1-204ENST00000505804 SH3PXD2BA1X283 911 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 KIAA0513O60268 411 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 RTN2O75298 545 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 CYP3A5P20815 502 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 IL4RP24394 825 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 SLC1A4P43007 532 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 TNFSF10P50591 281 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 KCNK10P57789 538 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 ZFP36L1Q07352 338 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 TEFQ10587 303 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 GK2Q14410 553 aaPredicted RBP3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 SLC17A1Q14916 467 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 HEPACAMQ14CZ8 416 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 STX1AQ16623 288 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 POM121L1PQ3SYA9 428 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 ODF2Q5BJF6 829 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 FAM182AQ5T1J6 154 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 CD164L2Q6UWJ8 174 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 SNX21Q969T3 373 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 MRPL24Q96A35 216 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 CFAP36Q96G28 342 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 CDHR1Q96JP9 859 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 CXorf58Q96LI9 332 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 MRPL9Q9BYD2 267 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 PUS3Q9BZE2 481 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms