RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RPE65Q16518 533 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ALG11Q2TAA5 492 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM35AQ53FP2 167 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ARMCX4Q5H9R4 360 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF544Q6NX49 715 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 WDR53Q7Z5U6 358 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-207ENST00000504761 SLC30A8Q8IWU4 369 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 GJD3Q8N144 294 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 CACTIN-AS1Q8N1I8 211 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 OR4C6Q8NH72 309 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 GTF2H4Q92759 462 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM19Q96HH6 336 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 MCHR1Q99705 422 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 PREBQ9HCU5 417 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 MARK1Q9P0L2 795 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 RIIAD1A6NNX1 92 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 TRMUO75648 421 aaKnown RBP13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ELK4P28324 431 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 DCDC1P59894 354 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 PIGFQ07326 219 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 FADDQ13158 208 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 NFATC4Q14934 902 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 TAF13Q15543 124 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 EIPR1Q53HC9 387 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 RPS26P11Q5JNZ5 115 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-207ENST00000504761 LCN8Q6JVE9 175 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 SLCO6A1Q86UG4 719 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 FUNDC1Q8IVP5 155 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ACOT4Q8N9L9 421 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 PSMA8Q8TAA3 256 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 LGR4Q9BXB1 951 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 EHD1Q9H4M9 534 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 CPNE7Q9UBL6 633 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ERVK-11Q9UQG0 969 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 OR51B4Q9Y5P0 310 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 SPTBN2O15020 2390 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 CCDC159P0C7I6 412 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 F3P13726 295 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 PSMD4P55036 377 aaKnown RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM215Q68D42 235 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 LRRC25Q8N386 305 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 FAM160A2Q8N612 972 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 NRG4Q8WWG1 115 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 PDXPQ96GD0 296 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 HMG20AQ9NP66 347 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 SSR3Q9UNL2 185 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 SOBPA7XYQ1 873 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF888P0CJ79 500 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 KCNC4Q03721 635 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 LGALS3BPQ08380 585 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 HSDL2Q6YN16 418 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF765Q7L2R6 523 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 OR5K2Q8NHB8 316 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 HDAC8Q9BY41 377 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 MAGED1Q9Y5V3 778 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 C17orf113A0A1B0GUU1 675 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 H3BSA7 217 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 TLX2O43763 284 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 SLCO2B1O94956 709 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 OLFM2O95897 454 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 FHP07954 510 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 CD6P30203 668 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 CDKL1Q00532 357 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 IQCCQ4KMZ1 466 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 SLC35F1Q5T1Q4 408 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 ALG1LQ6GMV1 187 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 METTL2BQ6P1Q9 378 aaKnown RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 C19orf18Q8NEA5 215 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 OR6K6Q8NGW6 343 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF707Q96C28 371 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 LYSMD1Q96S90 227 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 BRF2Q9HAW0 419 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 CBLP22681 906 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 TPMTP51580 245 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 RGNQ15493 299 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 CES4AQ5XG92 561 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 OR10H4Q8NGA5 316 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 OR5D16Q8NGK9 328 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 ELSPBP1Q96BH3 223 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 LIN28AQ9H9Z2 209 aaKnown RBP13.43□□□□□ -0.26
TCOF1-207ENST00000504761 OBP2AQ9NY56 170 aa13.43□□□□□ -0.26
TCOF1-207ENST00000504761 ELOA3DA6NLF2 546 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 EMC8O43402 210 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 GPR37L1O60883 481 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 KCNJ13O60928 360 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 B3GALT4O96024 378 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 KRT8P05787 483 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 LINGO3P0C6S8 592 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 RNH1P13489 461 aaKnown RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 GRK6P43250 576 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 ELOA3BQ3SY89 546 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF57Q68EA5 555 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 SLC30A6Q6NXT4 461 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 SLCO4C1Q6ZQN7 724 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 KBTBD8Q8NFY9 601 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 ELOA3Q8NG57 546 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 MCFD2Q8NI22 146 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms