RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CXorf58Q96LI9 332 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 GUCD1Q96NT3 240 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 TAAR6Q96RI8 345 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 ERGIC2Q96RQ1 377 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 RPP25Q9BUL9 199 aaKnown RBP2.67□□□□□ -1.98
PSPC1-205ENST00000497722 OCR1Q9BZK8 76 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 C2orf40Q9H1Z8 148 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 MRPL17Q9NRX2 175 aaKnown RBP2.67□□□□□ -1.98
PSPC1-205ENST00000497722 FAM212BQ9NTI7 297 aaPredicted RBP2.67□□□□□ -1.98
PSPC1-205ENST00000497722 ZCCHC3Q9NUD5 404 aaKnown RBP2.67□□□□□ -1.98
PSPC1-205ENST00000497722 MRTO4Q9UKD2 239 aaKnown RBP2.67□□□□□ -1.98
PSPC1-205ENST00000497722 KLK13Q9UKR3 277 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 OR1A2Q9Y585 309 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 CPQQ9Y646 472 aa2.67□□□□□ -1.98
PSPC1-205ENST00000497722 A0A0A6YYC8 382 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 IGHV3-20A0A0C4DH32 117 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 LOC390937A0A1W2PQ73 354 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 ARHGEF33A8MVX0 844 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 SHISA9B4DS77 424 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 ANHXE9PGG2 379 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 I3L1I5 382 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 GALR3O60755 368 aaPredicted RBP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 SH3BGRLO75368 114 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 CSO75390 466 aaKnown RBP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 OR6A2O95222 327 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 MT-ND1P03886 318 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 TPBGLP0DKB5 382 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 VCLP18206 1134 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 PPP2R1BP30154 601 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 SLC1A4P43007 532 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 ALDH3B1P43353 468 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 RPS27AP62979 156 aaKnown RBP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 CRMP1Q14194 572 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 HEPACAMQ14CZ8 416 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 TMEM44Q2T9K0 475 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 KCTD11Q693B1 232 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 RTL6Q6ICC9 239 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 RAPH1Q70E73 1250 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 SLC47A2Q86VL8 602 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 Q8N377 158 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 POM121L12Q8N7R1 296 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 SPC24Q8NBT2 197 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 CLEC1AQ8NC01 280 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 MSANTD4Q8NCY6 345 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 C8orf46Q8TAG6 207 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 KIAA1524Q8TCG1 905 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 HAS2Q92819 552 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 MRPL24Q96A35 216 aaKnown RBP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 DDX50Q9BQ39 737 aaKnown RBP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 FAM213AQ9BRX8 229 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 ADNPQ9H2P0 1102 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 LIME1Q9H400 295 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 GDF3Q9NR23 364 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 THYN1Q9P016 225 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 PSORS1C1Q9UIG5 152 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 NIP7Q9Y221 180 aaKnown RBP eCLIP2.66□□□□□ -1.98
PSPC1-205ENST00000497722 STYXL1Q9Y6J8 313 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 PCNX3Q9H6A9 2034 aa2.66□□□□□ -1.98
PSPC1-205ENST00000497722 TEX48A0A1B0GUV7 120 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 TMEM129A0AVI4 362 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 E9PAM4 449 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 P2RX6O15547 441 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 FMO6PO60774 539 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 SFTPBP07988 381 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 HMOX1P09601 288 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 NUDT17P0C025 328 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 OR9G9P0C7N8 305 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 ZNF18P17022 549 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 LMO2P25791 158 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 MARCKSP29966 332 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-205ENST00000497722 COPB2P35606 906 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 RPL34P49207 117 aaKnown RBP2.65□□□□□ -1.99
PSPC1-205ENST00000497722 PGFP49763 221 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 FHITP49789 147 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 KHKP50053 298 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 KRT83P78385 493 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 ARF5P84085 180 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 GABPAQ06546 454 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 ZFP36L1Q07352 338 aaKnown RBP2.65□□□□□ -1.99
PSPC1-205ENST00000497722 COX10Q12887 443 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 PEX6Q13608 980 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 STXBP2Q15833 593 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 C1orf189Q5VU69 101 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 AGAP7PQ5VUJ5 663 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 LIPJQ5W064 366 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 SEL1L3Q68CR1 1132 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 CAPN13Q6MZZ7 669 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-205ENST00000497722 NEPROQ6NW34 567 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 EMBQ6PCB8 327 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 CD164L2Q6UWJ8 174 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 Q6ZRG5 221 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 CYP4V2Q6ZWL3 525 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-205ENST00000497722 TIPARPQ7Z3E1 657 aaKnown RBP2.65□□□□□ -1.99
PSPC1-205ENST00000497722 CACUL1Q86Y37 369 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 LAX1Q8IWV1 398 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 SPAG16Q8N0X2 631 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 SAMD12Q8N8I0 201 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 C4orf32Q8N8J7 132 aa2.65□□□□□ -1.99
PSPC1-205ENST00000497722 BEST4Q8NFU0 473 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms