RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 OSBPL11Q9BXB4 747 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 Q9H521 79 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 CD320Q9NPF0 282 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 TMEM74BQ9NUR3 256 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 DLGAP2Q9P1A6 1054 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 MRPS2Q9Y399 296 aaKnown RBP12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 FANCMQ8IYD8 2048 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 MAGEA13PA6NCF6 341 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 SDC3O75056 442 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 ZNF23P17027 643 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 DEFB134Q4QY38 66 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 SLC48A1Q6P1K1 146 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 TSSK4Q6SA08 328 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 CHERPQ8IWX8 916 aaKnown RBP12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 NFKBIDQ8NI38 313 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 SUN3Q8TAQ9 357 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 HSH2DQ96JZ2 352 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 CNBD2Q96M20 576 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 DUSP15Q9H1R2 295 aaPredicted RBP12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 FAM60AQ9NP50 221 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 IL1RAPQ9NPH3 570 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 UCKL1Q9NWZ5 548 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 KCMF1Q9P0J7 381 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 RPS6KA6Q9UK32 745 aa12.94□□□□□ -0.34
SPTBN1-205ENST00000496323 MYO1GB0I1T2 1018 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 VILLO15195 856 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 AQP9O43315 295 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 GUCY1B2O75343 617 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 UBXN7O94888 489 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 PDGFBP01127 241 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 ST6GAL1P15907 406 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 PTGER1P34995 402 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 PRIM2P49643 509 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 RBBP4Q09028 425 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 SCARB2Q14108 478 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 TEAD4Q15561 434 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 C6orf120Q7Z4R8 191 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 SHISA5Q8N114 240 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 HORMAD2Q8N7B1 307 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 TFAP2CQ92754 450 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 SEMA6CQ9H3T2 930 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 RAD21L1Q9H4I0 556 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 LYARQ9NX58 379 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 ABCG2Q9UNQ0 655 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 DOLKQ9UPQ8 538 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 ARHGEF17Q96PE2 2063 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 LMO7DNF2Z398 122 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 PLOD2O00469 737 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 ERAL1O75616 437 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 SNRNP200O75643 2136 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 EIF2S1P05198 315 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 CTSBP07858 339 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 CCT3P49368 545 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 NCBP2P52298 156 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 MRPS35P82673 323 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 RUNX2Q13950 521 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 DEFB133Q30KQ1 61 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 IQCCQ4KMZ1 466 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 CYBRD1Q53TN4 286 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 TMEM154Q6P9G4 183 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 TMEM179BQ7Z7N9 219 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 CARM1Q86X55 608 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 ZDHHC21Q8IVQ6 265 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 CAMKVQ8NCB2 501 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 MAGEE2Q8TD90 523 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 ZNF681Q96N22 645 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 SERHL2Q9H4I8 314 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 UCK1Q9HA47 277 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 C8orf4Q9NR00 106 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 VNN3Q9NY84 501 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 PADI4Q9UM07 663 aa12.93□□□□□ -0.34
SPTBN1-205ENST00000496323 BCAT2O15382 392 aaPredicted RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 C9P02748 559 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 C8orf89P0DMQ9 161 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 ARAFP10398 606 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 HNRNPKP61978 463 aaKnown RBP eCLIP12.92□□□□□ -0.341e-10■□□□□ 11
SPTBN1-205ENST00000496323 KCNJ10P78508 379 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 VLDLRP98155 873 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 CDK6Q00534 326 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 PPP1R8Q12972 351 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 ZNF630Q2M218 657 aaPredicted RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 OTUD3Q5T2D3 398 aaPredicted RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 CWF19L1Q69YN2 538 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 ARMC6Q6NXE6 501 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 TNFAIP8L2Q6P589 184 aaPredicted RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 OGFOD3Q6PK18 319 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 CEACAM20Q6UY09 585 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 PRSS41Q7RTY9 318 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 ZC3H7AQ8IWR0 971 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 CCDC116Q8IYX3 515 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 HS3ST5Q8IZT8 346 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 RERGQ96A58 199 aaPredicted RBP12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 TAMM41Q96BW9 452 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 BBS4Q96RK4 519 aa12.92□□□□□ -0.34
SPTBN1-205ENST00000496323 SERINC2Q96SA4 455 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms