RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 HEPACAMQ14CZ8 416 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 NDUFAF5Q5TEU4 345 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 NOXRED1Q6NXP6 359 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 C19orf48Q6RUI8 117 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 KIRREL2Q6UWL6 708 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 RGS9BPQ6ZS82 235 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 CPEB2Q7Z5Q1 589 aaKnown RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 WDR75Q8IWA0 830 aaKnown RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 SCUBE1Q8IWY4 988 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 PARP9Q8IXQ6 854 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 SHISA5Q8N114 240 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 OR11G2Q8NGC1 345 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 EBPLQ9BY08 206 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 PRORYQ9H606 182 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 MARCOQ9UEW3 520 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 POLR3HQ9Y535 204 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 IGKV3D-11A0A0A0MRZ8 115 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 NSG1A0A0A6YYJ2 146 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 ATP6AP2A0A1C7CYW4 349 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 A0A1W2PQ72 361 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TCRBV16S1A1N1A0A5B0 115 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 OR2W5A6NFC9 320 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 PEX11AO75192 247 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 ATP6AP2O75787 350 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 HPP00738 406 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 KITP10721 976 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 DRD2P14416 443 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 MAOAP21397 527 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 HNRNPFP52597 415 aaKnown RBP16.06■□□□□ 0.16
HDAC6-235ENST00000495515 OR4D2P58180 307 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TAS2R50P59544 299 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 AP2B1P63010 937 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 KIAA0040Q15053 153 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 SMU1Q2TAY7 513 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 COL28A1Q2UY09 1125 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 C18orf63Q68DL7 685 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 BORAQ6PGQ7 559 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 NDUFAF7Q7L592 441 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 ANKRD37Q7Z713 158 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TMEM151BQ8IW70 566 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 LRRC34Q8IZ02 419 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TMEM132CQ8N3T6 1108 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 FNDC5Q8NAU1 212 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 CLEC1AQ8NC01 280 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TMEM52Q8NDY8 209 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 C16orf78Q8WTQ4 265 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 APOBEC4Q8WW27 367 aaKnown RBP16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TSLPQ969D9 159 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TM4SF18Q96CE8 201 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 C3orf30Q96M34 536 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 LPAR4Q99677 370 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 NUF2Q9BZD4 464 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 MEAF6Q9HAF1 191 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 TEX10Q9NXF1 929 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-235ENST00000495515 FBXL4Q9UKA2 621 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 DLGAP4Q9Y2H0 992 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 PCDHA9Q9Y5H5 950 aa16.06■□□□□ 0.16
HDAC6-235ENST00000495515 CHD6Q8TD26 2715 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 ARGFXA6NJG6 315 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 ICAM2P13598 275 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 RHDQ02161 417 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 EEF1A2Q05639 463 aaKnown RBP16.05■□□□□ 0.16
HDAC6-235ENST00000495515 RFTN2Q52LD8 501 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-235ENST00000495515 SFT2D3Q587I9 215 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 DCAF10Q5QP82 559 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 C6orf136Q5SQH8 315 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 LANCL3Q6ZV70 420 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 IKBIPQ70UQ0 350 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 CLNKQ7Z7G1 428 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 CDC26Q8NHZ8 85 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 C8orf44Q96CB5 159 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 FCRL1Q96LA6 429 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 PPP1R36Q96LQ0 422 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 PELOQ9BRX2 385 aaKnown RBP16.05■□□□□ 0.16
HDAC6-235ENST00000495515 TUBB6Q9BUF5 446 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 ALOXE3Q9BYJ1 711 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 ZNF700Q9H0M5 742 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 SLCO1B3Q9NPD5 702 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 ATP13A2Q9NQ11 1180 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 NECTIN3Q9NQS3 549 aa16.05■□□□□ 0.16
HDAC6-235ENST00000495515 EIF3LQ9Y262 564 aaKnown RBP16.05■□□□□ 0.16
HDAC6-235ENST00000495515 IGHV1-45A0A0A0MS14 117 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 GLOD5A6NK44 160 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 LDB3O75112 727 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 GPR75O95800 540 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 IFNA16P05015 189 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 JUNP05412 331 aaKnown RBP16.04■□□□□ 0.16
HDAC6-235ENST00000495515 IL3P08700 152 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 PRPS2P11908 318 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 COX6A1P12074 109 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 COX7A2P14406 83 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 PCSK2P16519 638 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 DDX5P17844 614 aaKnown RBP16.04■□□□□ 0.16
HDAC6-235ENST00000495515 PIK3R1P27986 724 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 ASMTP46597 345 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 ALDH9A1P49189 494 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 EFNA3P52797 238 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 FOLH1Q04609 750 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 AIMP2Q13155 320 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms