RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 MILR1Q7Z6M3 343 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 PTRH1Q86Y79 214 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 MYLK4Q86YV6 388 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 HPS6Q86YV9 775 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ZCCHC7Q8N3Z6 543 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 RBMXL3Q8N7X1 1067 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 GOLGA6L1Q8N7Z2 621 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ACOT4Q8N9L9 421 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 FAM47BQ8NA70 645 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 RDH11Q8TC12 318 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ADAMTS18Q8TE60 1221 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 TRPC4APQ8TEL6 797 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 REPS1Q96D71 796 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 APOPT1Q96IL0 206 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 THOC3Q96J01 351 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 FAR2Q96K12 515 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 FRG2BQ96QU4 278 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 MAPKAP1Q9BPZ7 522 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 TUBB6Q9BUF5 446 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 SORBS1Q9BX66 1292 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ROGDIQ9GZN7 287 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ZBTB20Q9HC78 741 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 FARSBQ9NSD9 589 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ANAPC2Q9UJX6 822 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 GDF2Q9UK05 429 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 PLLPQ9Y342 182 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 MMACHCQ9Y4U1 282 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 SPTA1P02549 2419 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 A0A0A6YYD5 115 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SAP18O00422 153 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 TYROBPO43914 113 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 TMPRSS11DO60235 418 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 EEDO75530 441 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SEC24DO94855 1032 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SORBS2O94875 1100 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 MLYCDO95822 493 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 PDYNP01213 254 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SERPINA7P05543 415 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 MYL2P10916 166 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 CREB1P16220 341 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 ITGA3P26006 1051 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 PTX3P26022 381 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 CASRP41180 1078 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SSR2P43308 183 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 CCT5P48643 541 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 HTR6P50406 440 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 HNRNPH2P55795 449 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 HSD17B7P56937 341 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 PHEXP78562 749 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 TGM3Q08188 693 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 IFFO1Q0D2I5 559 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 KLRB1Q12918 225 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 NSDHLQ15738 373 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 TCHHL1Q5QJ38 904 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 H3F3CQ6NXT2 135 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 PAPD4Q6PIY7 484 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 FRMD7Q6ZUT3 714 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 KBTBD2Q8IY47 623 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SRRM1Q8IYB3 904 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 ZNF595Q8IYB9 648 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 Q8NA96 180 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 NFAM1Q8NET5 270 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 AGAP11Q8TF27 550 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 METTL21AQ8WXB1 218 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 ATP6V1E2Q96A05 226 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 RGMAQ96B86 450 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 CCDC126Q96EE4 140 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 MAGEB10Q96LZ2 347 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 PTCHD1Q96NR3 888 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 ZIM3Q96PE6 472 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SLC29A3Q9BZD2 475 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 DDX31Q9H8H2 851 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 COPS7BQ9H9Q2 264 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 BRF2Q9HAW0 419 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 TNFRSF12AQ9NP84 129 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 OXSMQ9NWU1 459 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 FRRS1LQ9P0K9 344 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SLC17A7Q9P2U7 560 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 C19orf25Q9UFG5 118 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 PPIEQ9UNP9 301 aaKnown RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 TRIM33Q9UPN9 1127 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-217ENST00000494395 ASB4Q9Y574 426 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 SHANK1Q9Y566 2161 aa8.21□□□□□ -1.1
ITGB1-217ENST00000494395 ZNF462Q96JM2 2506 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 CCDC151A5D8V7 595 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 SAGE2PA6NJ88 616 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 PSMD12O00232 456 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 MANBAO00462 879 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 KLHL41O60662 606 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 DPM1O60762 260 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 ESRRBO95718 433 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 PLA2G2AP14555 144 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 CPA3P15088 417 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 TPP2P29144 1249 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 PPP2R1BP30154 601 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 ETV4P43268 484 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 RAP1GDS1P52306 607 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 NAGLUP54802 743 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms