RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FBXO15Q8NCQ5 510 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-220ENST00000492280 OR4C15Q8NGM1 316 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 OR5K2Q8NHB8 316 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 COX14Q96I36 57 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 HRASLS5Q96KN8 279 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 TEFMQ96QE5 360 aaKnown RBP11.84□□□□□ -0.51
HMGN1-220ENST00000492280 IL4I1Q96RQ9 567 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 MENTQ9BUN1 341 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 MS4A8Q9BY19 250 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 ACER3Q9NUN7 267 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF226Q9NYT6 803 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 CORO2BQ9UQ03 480 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 ADAMDEC1O15204 470 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 LINC01565O15544 149 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 ERAL1O75616 437 aaKnown RBP11.84□□□□□ -0.51
HMGN1-220ENST00000492280 GASTP01350 101 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 PPIBP23284 216 aaKnown RBP11.84□□□□□ -0.51
HMGN1-220ENST00000492280 TGFBR2P37173 567 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF33BQ06732 778 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 CD300CQ08708 224 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 FCHO2Q0JRZ9 810 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF793Q6ZN11 406 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 TAGAPQ8N103 731 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 GPR32P1Q8NGA4 272 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 GOT1L1Q8NHS2 421 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-220ENST00000492280 PHF10Q8WUB8 498 aaKnown RBP11.84□□□□□ -0.51
HMGN1-220ENST00000492280 NLNQ9BYT8 704 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 ZFR2Q9UPR6 939 aaKnown RBP11.84□□□□□ -0.51
HMGN1-220ENST00000492280 PCDHGA2Q9Y5H1 932 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 PRAMEF27A3QJZ7 478 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 PDZK1P1A8MUH7 402 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 C1QTNF3-AMACRE9PGA6 284 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 PDPK1O15530 556 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 GADD45GO95257 159 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 PTHP01270 115 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 ARAFP10398 606 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 PTX3P26022 381 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 CTSKP43235 329 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 IFITM3Q01628 133 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 DUSP2Q05923 314 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 PCDH1Q08174 1060 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 PDGFRLQ15198 375 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 SEC23BQ15437 767 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 TMEM52BQ4KMG9 183 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 DEPDC1Q5TB30 811 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 Q6ZNX1 250 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 UBE3DQ7Z6J8 389 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 KRT78Q8N1N4 520 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 LZICQ8WZA0 190 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 GGHQ92820 318 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D20Q96BZ9 403 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 YIPF6Q96EC8 236 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 SH3YL1Q96HL8 342 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 LINC00615Q96LM1 132 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 PITX2Q99697 317 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 MKRN2Q9H000 416 aaKnown RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 NMNAT1Q9HAN9 279 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 GPR34Q9UPC5 381 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 ANHXE9PGG2 379 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 M0R3H8 397 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 SLC31A1O15431 190 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 VEGFDO43915 354 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 OR12D1P0DN82 309 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 DDCP20711 480 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 GADD45AP24522 165 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 GGT2P36268 569 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 ST13P50502 369 aaKnown RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 CST6Q15828 149 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 MICAQ29983 383 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 LCTLQ6UWM7 567 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 DCDC5Q6ZRR9 648 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 TP53I13Q8NBR0 393 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 OR8K5Q8NH50 307 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 HCAR2Q8TDS4 363 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 FGF14Q92915 247 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF514Q96K75 400 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 CNDP2Q96KP4 475 aaKnown RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 SIRT3Q9NTG7 399 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-220ENST00000492280 TRPC4Q9UBN4 977 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 DUSP12Q9UNI6 340 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 STON1Q9Y6Q2 735 aa11.83□□□□□ -0.52
HMGN1-220ENST00000492280 C17orf113A0A1B0GUU1 675 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 OR2A25A4D2G3 310 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 TMEM247A6NEH6 219 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 C5orf58C9J3I9 102 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 M0R082 166 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 NDUFS4O43181 175 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 BMP4P12644 408 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 PIK3CBP42338 1070 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 SSR2P43308 183 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 XCR1P46094 333 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 HNRNPFP52597 415 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 PCBP3P57721 371 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 RAB8AP61006 207 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 RPS3AP61247 264 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 DBPQ10586 325 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms