RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TANKQ92844 425 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 GFM2Q969S9 779 aaKnown RBP17.55■□□□□ 0.4
MCF2L-230ENST00000491028 PPCDCQ96CD2 204 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 SCNM1Q9BWG6 230 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 CHST8Q9H2A9 424 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 CLMPQ9H6B4 373 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 WDR54Q9H977 334 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 ATAD3AQ9NVI7 634 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 TAS2R7Q9NYW3 318 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 CTSFQ9UBX1 484 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 PSME2Q9UL46 239 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 MMACHCQ9Y4U1 282 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 CAPN7Q9Y6W3 813 aa17.55■□□□□ 0.4
MCF2L-230ENST00000491028 TEX51A0A1B0GUA7 166 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 FAM234BA2RU67 622 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 SYNDIG1LA6NDD5 238 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 CLDN4O14493 209 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 BRINP1O60477 761 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 RAD1O60671 282 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 CYC1P08574 325 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 COX7A2P14406 83 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 HSD17B7P56937 341 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 SRSF11Q05519 484 aaKnown RBP17.54■□□□□ 0.4
MCF2L-230ENST00000491028 ACTN3Q08043 901 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-230ENST00000491028 KLF10Q13118 480 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 UGT8Q16880 541 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 FAM91A1Q658Y4 838 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 TICAM1Q8IUC6 712 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 MMP21Q8N119 569 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 OR9I1Q8NGQ6 314 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 DNAJB14Q8TBM8 379 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 STT3BQ8TCJ2 826 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 MIEF2Q96C03 454 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 TEX37Q96LM6 180 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 CCDC106Q9BWC9 280 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 RBCK1Q9BYM8 510 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 LANCL2Q9NS86 450 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 CCDC167Q9P0B6 97 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 CES1P1Q9UKY3 287 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 AK5Q9Y6K8 562 aa17.54■□□□□ 0.4
MCF2L-230ENST00000491028 DYTNA2CJ06 578 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 TRABD2BA6NFA1 517 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 VSTM2BA6NLU5 285 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 FAM227AF5H4B4 570 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 PGRMC2O15173 223 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 PRKRAO75569 313 aaKnown RBP17.53■□□□□ 0.4
MCF2L-230ENST00000491028 IL6P05231 212 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 RAB40ALP0C0E4 278 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 ZGLP1P0C6A0 271 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 PIK3R1P27986 724 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 IL12AP29459 219 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 POLR2JP52435 117 aaKnown RBP17.53■□□□□ 0.4
MCF2L-230ENST00000491028 HNRNPFP52597 415 aaKnown RBP17.53■□□□□ 0.4
MCF2L-230ENST00000491028 GABPB1Q06547 395 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-230ENST00000491028 RCAN2Q14206 197 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 NCF4Q15080 339 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 MAPRE2Q15555 327 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 NKG7Q16617 165 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 AGKQ53H12 422 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 MLIPQ5VWP3 458 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 LCN10Q6JVE6 187 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 QSOX2Q6ZRP7 698 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 SCUBE1Q8IWY4 988 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 SAMD14Q8IZD0 417 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-230ENST00000491028 TMEM52Q8NDY8 209 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 TSPEARQ8WU66 669 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 COQ8BQ96D53 544 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 ZNF578Q96N58 590 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-230ENST00000491028 AKIRIN1Q9H9L7 192 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-230ENST00000491028 PRTFDC1Q9NRG1 225 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 ARMCX1Q9P291 453 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 UTS2RQ9UKP6 389 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 MSRB2Q9Y3D2 182 aa17.53■□□□□ 0.4
MCF2L-230ENST00000491028 SPTBN4Q9H254 2564 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 GLOD5A6NK44 160 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 GABRR3A8MPY1 467 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 B4GALT2O60909 372 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 CTNSO60931 367 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 STAT5AP42229 794 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 KIR3DL1P43629 444 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 ZFP36L2P47974 494 aaKnown RBP17.52■□□□□ 0.4
MCF2L-230ENST00000491028 KCNK10P57789 538 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 FAM174BQ3ZCQ3 159 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 VWA2Q5GFL6 755 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 CPTPQ5TA50 214 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 FAM199XQ6PEV8 388 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-230ENST00000491028 FUNDC1Q8IVP5 155 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 SHISA5Q8N114 240 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 OR7A2PQ8NGA2 310 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 OR4K14Q8NGD5 310 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 OR8J2Q8NGG1 315 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 KLHL29Q96CT2 875 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 ERP27Q96DN0 273 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 SLC45A3Q96JT2 553 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 SPSB2Q99619 263 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 BHLHE41Q9C0J9 482 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-230ENST00000491028 GIMAP4Q9NUV9 329 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 SH3BP4Q9P0V3 963 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 ENTPD4Q9Y227 616 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms