RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GTF2H2Q13888 395 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 SERTAD2Q14140 314 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 CPSF6Q16630 551 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 LIPJQ5W064 366 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 C18orf63Q68DL7 685 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 GTF2H2CQ6P1K8 395 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 IL20RBQ6UXL0 311 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 RPTNQ6XPR3 784 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 C3P1Q6ZMU1 363 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 Q6ZPB1 254 aaPredicted RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 GOLGA7Q7Z5G4 137 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 FGD2Q7Z6J4 655 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 GPR180Q86V85 440 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 RELL1Q8IUW5 271 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 LURAP1LQ8IV03 231 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 CHERPQ8IWX8 916 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 PLD6Q8N2A8 252 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 GHDCQ8N2G8 530 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 MMGT1Q8N4V1 131 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF808Q8N4W9 903 aaPredicted RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 POGLUT1Q8NBL1 392 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 OR14A16Q8NHC5 309 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 ASB15Q8WXK1 588 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 MARVELD3Q96A59 401 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 PPWD1Q96BP3 646 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 IPPKQ9H8X2 491 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 TIMMDC1Q9NPL8 285 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 DMRT3Q9NQL9 472 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF358Q9NW07 568 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 ENTPD4Q9Y227 616 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 MEMO1Q9Y316 297 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 RNF11Q9Y3C5 154 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 SYNDIG1LA6NDD5 238 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 WASHC1A8K0Z3 465 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 A8MVJ9 347 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PLPP1O14494 284 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 TFECO14948 347 aaPredicted RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 HNRNPRO43390 633 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 HS6ST1O60243 411 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 FGF17O60258 216 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 EEDO75530 441 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PRKRAO75569 313 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PDE9AO76083 593 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 INHBAP08476 426 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PRF1P14222 555 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PTX3P26022 381 aaPredicted RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 HTR1EP28566 365 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 SOX3P41225 446 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PIK3CGP48736 1102 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 HK2P52789 917 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 RNF4P78317 190 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PCBP2Q15366 365 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 CEP128Q6ZU80 1094 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 NCCRP1Q6ZVX7 275 aaPredicted RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 DOLPP1Q86YN1 238 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 UHMK1Q8TAS1 419 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 SLC2A12Q8TD20 617 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 DOK4Q8TEW6 326 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 AGAP11Q8TF27 550 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 SLC44A1Q8WWI5 657 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 MTFMTQ96DP5 389 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PHF21BQ96EK2 531 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 SENP5Q96HI0 755 aaPredicted RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 SCYL1Q96KG9 808 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 RASL10BQ96S79 203 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 CENPKQ9BS16 269 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 RPF2Q9H7B2 306 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 NOL11Q9H8H0 719 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 DEPPQ9NTK1 212 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 HPF1Q9NWY4 346 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 ATG4BQ9Y4P1 393 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 TNPO3Q9Y5L0 923 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 IKBKGQ9Y6K9 419 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 ITPR2Q14571 2701 aa11.08□□□□□ -0.64
CCHCR1-215ENST00000488920 A0A1B0GTH9 108 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 PINLYPA6NC86 204 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 GLOD5A6NK44 160 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 POC1B-GALNT4F8VUJ3 575 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 G3V3Y1 287 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 H0YIV9 168 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 OR7A17O14581 309 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 CDC40O60508 579 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 TUBB4AP04350 444 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 TLX1P31314 330 aaPredicted RBP11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 ARL1P40616 181 aaPredicted RBP11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 STT3AP46977 705 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 NR0B1P51843 470 aaKnown RBP11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 SMSP52788 366 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 HNRNPH2P55795 449 aaKnown RBP11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 PHEXP78562 749 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 FOLH1Q04609 750 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 CDSNQ15517 529 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 ZNF750Q32MQ0 723 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 CMPK2Q5EBM0 449 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 TECRLQ5HYJ1 363 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 MYO7BQ6PIF6 2116 aa11.07□□□□□ -0.64
CCHCR1-215ENST00000488920 XKRXQ6PP77 449 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms