RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ZC2HC1BQ5TFG8 222 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 SH2D6Q7Z4S9 175 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 LRRTM1Q86UE6 522 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 BATF2Q8N1L9 274 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 METTL4Q8N3J2 472 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 NEK11Q8NG66 645 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 EXOC6Q8TAG9 804 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 C11orf45Q8TAV5 145 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 SLC13A3Q8WWT9 602 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 LIPHQ8WWY8 451 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 ATXN7L3BQ96GX2 97 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 POM121L2Q96KW2 1035 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 SPATA13Q96N96 652 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 LGMNQ99538 433 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 AGPAT1Q99943 283 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 MCRIP2Q9BUT9 160 aaKnown RBP2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 WWP1Q9H0M0 922 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 UPF3AQ9H1J1 476 aaKnown RBP2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 CARD9Q9H257 536 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 TNMDQ9H2S6 317 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 DPEP3Q9H4B8 488 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 DCLRE1BQ9H816 532 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 KCNK13Q9HB14 408 aa2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 DDX28Q9NUL7 540 aaKnown RBP2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 STRAPQ9Y3F4 350 aaKnown RBP2.96□□□□□ -1.94
SNRNP27-204ENST00000487029 RPGRIP1LQ68CZ1 1315 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MEX3AA1L020 520 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MACROD2A1Z1Q3 448 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 SHISA7A6NL88 538 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 TRAFD1O14545 582 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 CSDE1O75534 798 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 CALCAP01258 141 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 SERPINF2P08697 491 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 TPBGLP0DKB5 382 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 UGT1A4P22310 534 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 GLRA1P23415 457 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 FCGR2BP31994 310 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 FCGR2CP31995 323 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 ALDH3B1P43353 468 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 HNRNPFP52597 415 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 CRYBA2P53672 197 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 SLC12A3P55017 1021 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 GEMP55040 296 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 STARD6P59095 220 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 SRP54P61011 504 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 ABCE1P61221 599 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 HERV-K104P63124 156 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 IRX1P78414 480 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 CCZ1BP86790 482 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 CCZ1P86791 482 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 RBBP4Q09028 425 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 WASHC5Q12768 1159 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 CALCOCO2Q13137 446 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 KIAA0141Q14154 515 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 SLC1A5Q15758 541 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MLF2Q15773 248 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 UPP1Q16831 310 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MPPE1Q53F39 396 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 PRAMEF7Q5VXH5 474 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 DLEU7Q6UYE1 221 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 GDPGP1Q6ZNW5 385 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MIER3Q7Z3K6 550 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 ZFAND4Q86XD8 727 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 OR4N5Q8IXE1 308 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 ZNF619Q8N2I2 560 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 AQP11Q8NBQ7 271 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MAPK1IP1LQ8NDC0 245 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 TMEM185AQ8NFB2 350 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 OR52B6Q8NGF0 335 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 OR6M1Q8NGM8 313 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 OR6F1Q8NGZ6 308 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 OR4L1Q8NH43 312 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 GOLGA5Q8TBA6 731 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 KIAA1524Q8TCG1 905 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 PCED1BQ96HM7 432 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 LINC00479Q96M42 142 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 AGAP4Q96P64 663 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 TMEM237Q96Q45 408 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 RAB40CQ96S21 281 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 PKP2Q99959 881 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 DDX47Q9H0S4 455 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 ABCG4Q9H172 646 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 TRPV6Q9H1D0 765 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 SYTL2Q9HCH5 934 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 FAM212BQ9NTI7 297 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 THEGQ9P2T0 379 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 ASIC3Q9UHC3 531 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 NARFQ9UHQ1 456 aa2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MRTO4Q9UKD2 239 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 RPH3AQ9Y2J0 694 aaPredicted RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 MRPS2Q9Y399 296 aaKnown RBP2.95□□□□□ -1.94
SNRNP27-204ENST00000487029 IGHV3-38A0A0C4DH36 116 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 A0A1W2PNU3 283 aaPredicted RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 OR5H15A6NDH6 313 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 CCDC69A6NI79 296 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 EEF2KO00418 725 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 CHEK1O14757 476 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 IDH3BO43837 385 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms