RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ZNF839A8K0R7 811 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 LGALS16A8MUM7 142 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 TGFAP01135 160 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 KRT1P04264 644 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 CPN1P15169 458 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 CHRM3P20309 590 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 TBXA2RP21731 343 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 PSMA3P25788 255 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 HSD17B2P37059 387 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 SIRPAP78324 504 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 ELAVL1Q15717 326 aaKnown RBP10.74□□□□□ -0.69
USP11-208ENST00000480104 PHKG1Q16816 387 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 CT47A1Q5JQC4 288 aaPredicted RBP10.74□□□□□ -0.69
USP11-208ENST00000480104 PTRHD1Q6GMV3 140 aaKnown RBP10.74□□□□□ -0.69
USP11-208ENST00000480104 BZW1Q7L1Q6 419 aaKnown RBP10.74□□□□□ -0.69
USP11-208ENST00000480104 GPSM1Q86YR5 675 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 TMEM132CQ8N3T6 1108 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 TC2NQ8N9U0 490 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 OR8K3Q8NH51 312 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 C10orf105Q8TEF2 133 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 FAM168AQ92567 244 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 HTRA1Q92743 480 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 GNRHR2Q96P88 292 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 ALS2CR12Q96Q35 445 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 TTC1Q99614 292 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 PKP2Q99959 881 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 FERMT1Q9BQL6 677 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 C10orf88Q9H8K7 445 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.69
USP11-208ENST00000480104 ZNF148Q9UQR1 794 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 B3GALT5Q9Y2C3 310 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 C15orf41Q9Y2V0 281 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 AAR2Q9Y312 384 aaKnown RBP10.74□□□□□ -0.69
USP11-208ENST00000480104 CLCA3PQ9Y6N3 262 aa10.74□□□□□ -0.69
USP11-208ENST00000480104 NRDCO43847 1150 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 RGS9O75916 674 aaPredicted RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 ACTL6AO96019 429 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 GOT2P00505 430 aaKnown RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 CRHP06850 196 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 PPP3CBP16298 524 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 HRH2P25021 359 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 KIR2DL2P43627 348 aaPredicted RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 MPEG1Q2M385 716 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 FBLN7Q53RD9 439 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 CDKAL1Q5VV42 579 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 BICRALQ6AI39 1079 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 ITPRIPL1Q6GPH6 555 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 NIPAL1Q6NVV3 410 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 AFTPHQ6ULP2 937 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 YRDCQ86U90 279 aaKnown RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 LRRC56Q8IYG6 542 aaPredicted RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 CA13Q8N1Q1 262 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 MFSD9Q8NBP5 474 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 OR5L2Q8NGL0 311 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 ATL1Q8WXF7 558 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 PROX1Q92786 737 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 HAUS1Q96CS2 278 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 PANX2Q96RD6 677 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 ERGIC2Q96RQ1 377 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 PRR14Q9BWN1 585 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 FAM129AQ9BZQ8 928 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 BHLHE41Q9C0J9 482 aaPredicted RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 FAM114A2Q9NRY5 505 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 PIH1D1Q9NWS0 290 aaKnown RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 HEY2Q9UBP5 337 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 MYO6Q9UM54 1294 aa10.73□□□□□ -0.69
USP11-208ENST00000480104 WBP11Q9Y2W2 641 aaKnown RBP10.73□□□□□ -0.69
USP11-208ENST00000480104 MYOCOSA0A1B0GUC4 107 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 MROH6A6NGR9 719 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 LINC01387J3KSC0 135 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 PRMT5O14744 637 aaPredicted RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 CGAP01215 116 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 IFNA16P05015 189 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 SERPIND1P05546 499 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 SKILP12757 684 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 CHMP24386 653 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 RPL21P46778 160 aaKnown RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 HNRNPFP52597 415 aaKnown RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 RAB8AP61006 207 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 IRX1P78414 480 aaPredicted RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 UBXN1Q04323 297 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 KLHL30Q0D2K2 578 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 GGTLC2Q14390 218 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 EXOC3L2Q2M3D2 409 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 FNDC7Q5VTL7 733 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 ALKBH2Q6NS38 261 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 SCIMPQ6UWF3 145 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 ZNF534Q76KX8 674 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 CLNKQ7Z7G1 428 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 DTX2Q86UW9 622 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 ZNF610Q8N9Z0 462 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 MORN4Q8NDC4 146 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 TMEM52Q8NDY8 209 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 FAM83FQ8NEG4 500 aaPredicted RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 OR13J1Q8NGT2 312 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 PTPMT1Q8WUK0 201 aaPredicted RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 DAZLQ92904 295 aaKnown RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 ZNF845Q96IR2 970 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms