RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 NLNQ9BYT8 704 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PITPNM3Q9BZ71 974 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 SLC7A5P2Q9GIP4 190 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ZMAT4Q9H898 229 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM165Q9HC07 324 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 SAR1AQ9NR31 198 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM184CQ9NVA4 438 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 SPHK1Q9NYA1 384 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 NKIRAS1Q9NYS0 192 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM216Q9P0N5 145 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM9Q9P0T7 183 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PTBP2Q9UKA9 531 aaKnown RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 IKZF3Q9UKT9 509 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 SATB2Q9UPW6 733 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 SLC22A14Q9Y267 594 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 LOXL2Q9Y4K0 774 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PTPRBP23467 1997 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 ASXL3Q9C0F0 2248 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 IGHV5-51A0A0C4DH38 117 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 A0A1B0GVG6 124 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 A0A1W2PPV9 198 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SH3PXD2BA1X283 911 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 KRT87PA6NCN2 255 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PRAMEF25A6NGN4 478 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SLC9B1P1A6NJY1 282 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 EFCAB7A8K855 629 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 A8MT66 165 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 NUDT19A8MXV4 375 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 B4E171 279 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TXNDC9O14530 226 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 POLR1CO15160 346 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PRPF4O43172 522 aaKnown RBP eCLIP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 AKAP10O43572 662 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PRICKLE3O43900 615 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 KLK8O60259 260 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PLIN3O60664 434 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SPAG7O75391 227 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 DCTN3O75935 186 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 MLYCDO95822 493 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TOP3BO95985 862 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 KRT16P08779 473 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 ST6GAL1P15907 406 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF12P17014 697 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 MAGP20916 626 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PSMB5P28074 263 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 RBMS1P29558 406 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 EEF1DP29692 281 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PEBP1P30086 187 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 HPDP32754 393 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TSPAN7P41732 249 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 GRIA3P42263 894 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SLC6A12P48065 614 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 MAPK10P53779 464 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 MAGOHP61326 146 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PPP1CAP62136 330 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 RPS15AP62244 130 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 HERVK_113P63132 956 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 CFHR1Q03591 330 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 FOXM1Q08050 763 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TUBB3Q13509 450 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PIN1Q13526 163 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 GTF2H2Q13888 395 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 IL11RAQ14626 422 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PCBP2Q15366 365 aaKnown RBP eCLIP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 RBBP7Q16576 425 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 C3orf38Q5JPI3 329 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TCTE1Q5JU00 501 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 DCAF12Q5T6F0 453 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 RNF220Q5VTB9 566 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 LIPMQ5VYY2 423 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 KIAA1614Q5VZ46 1190 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 GTF2H2CQ6P1K8 395 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 CEACAM20Q6UY09 585 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 ZYG11AQ6WRX3 759 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 B3GNT6Q6ZMB0 384 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 Q6ZNX1 250 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 RGS9BPQ6ZS82 235 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TMPRSS9Q7Z410 1059 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 B3GNT8Q7Z7M8 397 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TMPRSS11BQ86T26 416 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 PPP1R3BQ86XI6 285 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 GPR135Q8IZ08 494 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 D2HGDHQ8N465 521 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TTC29Q8NA56 475 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TTLQ8NG68 377 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 OR2A1Q8NGT9 310 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TCP10LQ8TDR4 215 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 LRRC8CQ8TDW0 803 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 UBE2E3Q969T4 207 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 REPS1Q96D71 796 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 NXPE2Q96DL1 559 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SLC41A2Q96JW4 573 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 FAM111AQ96PZ2 611 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TEFMQ96QE5 360 aaKnown RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF184Q99676 751 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-209ENST00000479532 SELENOSQ9BQE4 189 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 AIF1LQ9BQI0 150 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM79Q9BSE2 394 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 DPH7Q9BTV6 452 aa5.89□□□□□ -1.47
SF3B1-209ENST00000479532 ERVK-6Q9BXR3 956 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms