RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SEMA4BQ9NPR2 832 aaPredicted RBP14.83□□□□□ -0.04
DDX56-210ENST00000479440 IARS2Q9NSE4 1012 aaKnown RBP14.83□□□□□ -0.04
DDX56-210ENST00000479440 VTI1BQ9UEU0 232 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 DNAJC13O75165 2243 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 C15orf38-AP3S2A0A0A6YYH1 394 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 C17orf105B2RV13 164 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 HRGP04196 525 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 TNNI3P19429 210 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 KCNJ1P48048 391 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 TIAL1Q01085 375 aaKnown RBP eCLIP14.82□□□□□ -0.04
DDX56-210ENST00000479440 GPS1Q13098 491 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 TRIP13Q15645 432 aaPredicted RBP14.82□□□□□ -0.04
DDX56-210ENST00000479440 HSP90AA5PQ58FG0 334 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 ANKRD22Q5VYY1 191 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 TRIM40Q6P9F5 258 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 DND1Q8IYX4 353 aaKnown RBP14.82□□□□□ -0.04
DDX56-210ENST00000479440 LRRC75A-AS1Q8N1F1 130 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 ZNF321PQ8N8H1 164 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 C2CD4AQ8NCU7 369 aaPredicted RBP14.82□□□□□ -0.04
DDX56-210ENST00000479440 PAQR8Q8TEZ7 354 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 PTPMT1Q8WUK0 201 aaPredicted RBP14.82□□□□□ -0.04
DDX56-210ENST00000479440 MS4A6EQ96DS6 147 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 SERPINB12Q96P63 405 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 SERINC2Q96SA4 455 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 CSF3RQ99062 836 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 BAG1Q99933 345 aaPredicted RBP14.82□□□□□ -0.04
DDX56-210ENST00000479440 DESI2Q9BSY9 194 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 TRMT1Q9NXH9 659 aaKnown RBP14.82□□□□□ -0.04
DDX56-210ENST00000479440 ARHGAP21Q5T5U3 1957 aa14.82□□□□□ -0.04
DDX56-210ENST00000479440 LRRC3CA6NJW4 275 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 ZNF354AO60765 605 aaPredicted RBP14.81□□□□□ -0.04
DDX56-210ENST00000479440 CTNSO60931 367 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 COX7A2P14406 83 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 HNRNPH1P31943 449 aaKnown RBP14.81□□□□□ -0.04
DDX56-210ENST00000479440 ZNF136P52737 540 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 CDKN2DP55273 166 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 LIM2P55344 173 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 ZNF791Q3KP31 576 aaPredicted RBP14.81□□□□□ -0.04
DDX56-210ENST00000479440 PIGGQ5H8A4 983 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 RBM20Q5T481 1227 aaKnown RBP14.81□□□□□ -0.04
DDX56-210ENST00000479440 PRAMEF20Q5VT98 475 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 CXorf67Q86X51 503 aaPredicted RBP14.81□□□□□ -0.04
DDX56-210ENST00000479440 MCUQ8NE86 351 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 C7orf57Q8NEG2 295 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 LINC01560Q8TB33 94 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 NUBPLQ8TB37 319 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 SMPDL3BQ92485 455 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 KIAA1191Q96A73 305 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 SPACA9Q96E40 222 aaPredicted RBP14.81□□□□□ -0.04
DDX56-210ENST00000479440 ALOXE3Q9BYJ1 711 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 SH2D2AQ9NP31 389 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 HOMER3Q9NSC5 361 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 DAPP1Q9UN19 280 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 SLC22A14Q9Y267 594 aa14.81□□□□□ -0.04
DDX56-210ENST00000479440 HRNRQ86YZ3 2850 aaPredicted RBP14.81□□□□□ -0.04
DDX56-210ENST00000479440 LRIT2A6NDA9 550 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 H7C1Q1 480 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 CYR61O00622 381 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 DYRK3O43781 588 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 SMPD2O60906 423 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 FGGP02679 453 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 RFPL3SP0C7P2 107 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 GDF1P27539 372 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 CERS1P27544 350 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 OPRM1P35372 400 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 TRPC1P48995 793 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 PLA2G16P53816 162 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 MTTPP55157 894 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 WNT3P56703 355 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 CRYZQ08257 329 aaKnown RBP14.8□□□□□ -0.04
DDX56-210ENST00000479440 ASPHQ12797 758 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 POU4F3Q15319 338 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 NSUN5P2Q63ZY6 315 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 POMZP3Q6PJE2 187 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 ADGRD1Q6QNK2 874 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 OR2L5Q8NG80 312 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 ZNF592Q92610 1267 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 ZNF597Q96LX8 424 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 JSRP1Q96MG2 331 aaPredicted RBP14.8□□□□□ -0.04
DDX56-210ENST00000479440 DACH2Q96NX9 599 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 QRFPRQ96P65 431 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 BDH2Q9BUT1 245 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 REXO4Q9GZR2 422 aaKnown RBP14.8□□□□□ -0.04
DDX56-210ENST00000479440 PRDM14Q9GZV8 571 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 RYDENQ9NUL5 291 aaKnown RBP14.8□□□□□ -0.04
DDX56-210ENST00000479440 CNIH4Q9P003 139 aa14.8□□□□□ -0.04
DDX56-210ENST00000479440 GOLGA8MH3BSY2 632 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 H2AFYO75367 372 aaKnown RBP14.79□□□□□ -0.04
DDX56-210ENST00000479440 FN1P02751 2386 aaKnown RBP14.79□□□□□ -0.04
DDX56-210ENST00000479440 CCDC175P0C221 793 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 C1GALT1C1LP0DN25 315 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 GNAZP19086 355 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 CTSSP25774 331 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 TGM3Q08188 693 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 DUSP8Q13202 625 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 SLBPQ14493 270 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX56-210ENST00000479440 TMIGD1Q6UXZ0 262 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 CAPN12Q6ZSI9 719 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 KRT78Q8N1N4 520 aa14.79□□□□□ -0.04
DDX56-210ENST00000479440 VWA5B2Q8N398 1253 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms