RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 IMPAD1Q9NX62 359 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 TEX10Q9NXF1 929 aaPredicted RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 POU2F3Q9UKI9 436 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 HCN2Q9UL51 889 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 DUSP12Q9UNI6 340 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 CORO2BQ9UQ03 480 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 OR1A2Q9Y585 309 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 PRR23AA6NEV1 266 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 CLCA1A8K7I4 914 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 LCMT2O60294 686 aaKnown RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 GADD45GO95257 159 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 PRNPP04156 253 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 CDK1P06493 297 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 SRPRAP08240 638 aaKnown RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 TGM4P49221 684 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 FAM78AQ5JUQ0 283 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 UBE2UQ5VVX9 321 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 TRIM40Q6P9F5 258 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 ADGRD2Q7Z7M1 963 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 ZNF605Q86T29 641 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 LACC1Q8IV20 430 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 ETFBKMTQ8IXQ9 262 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 GPR32P1Q8NGA4 272 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 OR2L2Q8NH16 312 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 BADQ92934 168 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 TM4SF18Q96CE8 201 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 ABHD8Q96I13 439 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 RERGLQ9H628 205 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 C11orf49Q9H6J7 331 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 CERS4Q9HA82 394 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 LHX9Q9NQ69 397 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 WDR37Q9Y2I8 494 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 PLEKHM1Q9Y4G2 1056 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 MYO10Q9HD67 2058 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 TMPRSS11DO60235 418 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CYP7B1O75881 506 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 FGBP02675 491 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CKMT1AP12532 417 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 HOXB6P17509 224 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 ALOX12P18054 663 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 ITGB7P26010 798 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 P2RY2P41231 377 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 IL12RB1P42701 662 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 PCBP3P57721 371 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 RAB15P59190 212 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 DSTNP60981 165 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 FCHO2Q0JRZ9 810 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 ELP6Q0PNE2 266 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 SFSWAPQ12872 951 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 ZNF750Q32MQ0 723 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 OR5D16Q8NGK9 328 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 METTL2AQ96IZ6 378 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 LRIG1Q96JA1 1093 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 PIP5K1AQ99755 562 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CDADC1Q9BWV3 514 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 NMNAT1Q9HAN9 279 aaPredicted RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 IL23AQ9NPF7 189 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 MBNL1Q9NR56 388 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 CTPS2Q9NRF8 586 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 C14orf119Q9NWQ9 140 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 KIAA1549LQ6ZVL6 1849 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 A0A1W2PS29 197 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 PRAMEF27A3QJZ7 478 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 METTL15A6NJ78 407 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CLDN24A6NM45 220 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 GRXCR1A8MXD5 290 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 SH3BP5O60239 455 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CNOT3O75175 753 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 KCNK2O95069 426 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 ARAFP10398 606 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CD72P21854 359 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CHMP24386 653 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 CNR2P34972 360 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 RCVRNP35243 200 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 PPP5CP53041 499 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 MAPK12P53778 367 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 MANFP55145 182 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 TSTQ16762 297 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 CRB2Q5IJ48 1285 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 TPRG1LQ5T0D9 272 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 OXR1Q8N573 874 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 FBXO15Q8NCQ5 510 aaPredicted RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 IPCEF1Q8WWN9 437 aaPredicted RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 OR8D1Q8WZ84 308 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 POP5Q969H6 163 aaKnown RBP10.28□□□□□ -0.76
VPS52-217ENST00000478934 TMEM19Q96HH6 336 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 YIPF4Q9BSR8 244 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 PRR14Q9BWN1 585 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 SPATA9Q9BWV2 254 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 SERHL2Q9H4I8 314 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 EPHX3Q9H6B9 360 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 TMEM38AQ9H6F2 299 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 MARCH7Q9H992 704 aa10.28□□□□□ -0.76
VPS52-217ENST00000478934 LINC00854A0A1B0GVQ3 168 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 TBC1D3BA6NDS4 549 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 KIAA0355O15063 1070 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 UPK1BO75841 260 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 NTN1O95631 604 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 EPHX1P07099 455 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms