RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 CCT7Q99832 543 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 ILKAPQ9H0C8 392 aaPredicted RBP25.15■■□□□ 1.62
CCM2-211ENST00000478582 ZNF700Q9H0M5 742 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 MCM8Q9UJA3 840 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 FBXL4Q9UKA2 621 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 CLDN16Q9Y5I7 305 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 IGHV1-45A0A0A0MS14 117 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 ARHGAP10A1A4S6 786 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 SYNDIG1LA6NDD5 238 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 RGS14O43566 566 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 SNNO75324 88 aaPredicted RBP25.14■■□□□ 1.62
CCM2-211ENST00000478582 HPP00738 406 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 GBAP04062 536 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 COX6A1P12074 109 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 TLX1P31314 330 aaPredicted RBP25.14■■□□□ 1.62
CCM2-211ENST00000478582 BUD31P41223 144 aaPredicted RBP25.14■■□□□ 1.62
CCM2-211ENST00000478582 TRA2BP62995 288 aaKnown RBP25.14■■□□□ 1.62
CCM2-211ENST00000478582 ACSM2AQ08AH3 577 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 ACSM2BQ68CK6 577 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 Q6ZSR9 355 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 LANCL3Q6ZV70 420 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 NDUFAF7Q7L592 441 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 CPEB2Q7Z5Q1 589 aaKnown RBP25.14■■□□□ 1.62
CCM2-211ENST00000478582 PTRH1Q86Y79 214 aaKnown RBP25.14■■□□□ 1.62
CCM2-211ENST00000478582 EFCAB3Q8N7B9 438 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 AGR3Q8TD06 166 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 TSLPQ969D9 159 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 ING2Q9H160 280 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 MANSC1Q9H8J5 431 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 NECTIN3Q9NQS3 549 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 THAP1Q9NVV9 213 aa25.14■■□□□ 1.62
CCM2-211ENST00000478582 SPTA1P02549 2419 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 A0A1W2PR48 441 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 TCRBV16S1A1N1A0A5B0 115 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 KLF11O14901 512 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 MAOAP21397 527 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 MAPK12P53778 367 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 RAE1P78406 368 aaKnown RBP25.13■■□□□ 1.61
CCM2-211ENST00000478582 PCOLCEQ15113 449 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 LACTB2Q53H82 288 aaPredicted RBP25.13■■□□□ 1.61
CCM2-211ENST00000478582 SPDYAQ5MJ70 313 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 TCTN3Q6NUS6 607 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 ZNF781Q8N8C0 355 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 C7orf57Q8NEG2 295 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 FAM76AQ8TAV0 307 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 TANKQ92844 425 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 TRIM55Q9BYV6 548 aa25.13■■□□□ 1.61
CCM2-211ENST00000478582 RPF2Q9H7B2 306 aaKnown RBP25.13■■□□□ 1.61
CCM2-211ENST00000478582 PIP5K1BO14986 540 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 GUCY1B2O75343 617 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 LINC00032P0C843 101 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 RPL14P50914 215 aaKnown RBP25.12■■□□□ 1.61
CCM2-211ENST00000478582 SOX8P57073 446 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 SLC13A2Q13183 592 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 CPZQ66K79 652 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 OR2T11Q8NH01 316 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 ATP13A2Q9NQ11 1180 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 TP53TG5Q9Y2B4 290 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 PTGDR2Q9Y5Y4 395 aa25.12■■□□□ 1.61
CCM2-211ENST00000478582 DNAJB5O75953 348 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 TIA1P31483 386 aaKnown RBP eCLIP25.11■■□□□ 1.61
CCM2-211ENST00000478582 EEF1A2Q05639 463 aaKnown RBP25.11■■□□□ 1.61
CCM2-211ENST00000478582 BTKQ06187 659 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 AIMP2Q13155 320 aaKnown RBP25.11■■□□□ 1.61
CCM2-211ENST00000478582 KIAA0040Q15053 153 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 XKR7Q5GH72 579 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 C18orf63Q68DL7 685 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 ZNF75CPQ92670 426 aaPredicted RBP25.11■■□□□ 1.61
CCM2-211ENST00000478582 TM4SF18Q96CE8 201 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 IMMP1LQ96LU5 166 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 WDR77Q9BQA1 342 aaPredicted RBP25.11■■□□□ 1.61
CCM2-211ENST00000478582 TUBB6Q9BUF5 446 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 WDR41Q9HAD4 459 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 PFDN4Q9NQP4 134 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 RIC8BQ9NVN3 520 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 C1orf109Q9NX04 203 aa25.11■■□□□ 1.61
CCM2-211ENST00000478582 MED13Q9UHV7 2174 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 NSG1A0A0A6YYJ2 146 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 TGFBR3LH3BV60 316 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 PCDH7O60245 1069 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 AIFM1O95831 613 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 NR2F6P10588 404 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 GSTM5P46439 218 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 OR4D2P58180 307 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 BIKQ13323 160 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 SFT2D3Q587I9 215 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 DDIASQ8IXT1 998 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 CLEC1AQ8NC01 280 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 ANKRD9Q96BM1 317 aaPredicted RBP25.1■■□□□ 1.61
CCM2-211ENST00000478582 LRTM1Q9HBL6 345 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 TEX10Q9NXF1 929 aaPredicted RBP25.1■■□□□ 1.61
CCM2-211ENST00000478582 ANAPC2Q9UJX6 822 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 BSNQ9UPA5 3926 aa25.1■■□□□ 1.61
CCM2-211ENST00000478582 HELZ2Q9BYK8 2649 aaKnown RBP25.1■■□□□ 1.61
CCM2-211ENST00000478582 GCN1Q92616 2671 aaKnown RBP25.09■■□□□ 1.61
CCM2-211ENST00000478582 K7EM74 188 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 LSM1O15116 133 aaKnown RBP25.09■■□□□ 1.61
CCM2-211ENST00000478582 SEC22BO75396 215 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 CEACAM4O75871 244 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 NR1D1P20393 614 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms