RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SEPT8Q92599 483 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 MR1Q95460 341 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 ZNF274Q96GC6 653 aaPredicted RBP4.92□□□□□ -1.62
SMC5-203ENST00000475540 MYCBPQ99417 103 aaPredicted RBP4.92□□□□□ -1.62
SMC5-203ENST00000475540 CCM2Q9BSQ5 444 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 IDI2Q9BXS1 227 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 MID1IP1Q9NPA3 183 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 MGAT4AQ9UM21 535 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 NIP7Q9Y221 180 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMC5-203ENST00000475540 HBS1LQ9Y450 684 aaKnown RBP4.92□□□□□ -1.62
SMC5-203ENST00000475540 MTF2Q9Y483 593 aaPredicted RBP4.92□□□□□ -1.62
SMC5-203ENST00000475540 SALL1Q9NSC2 1324 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 TRBV5-4A0A0C4DH59 114 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 BCLAF3A2AJT9 711 aaKnown RBP4.91□□□□□ -1.62
SMC5-203ENST00000475540 CCDC69A6NI79 296 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 A8MU10 97 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 E9PAM4 449 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 ANHXE9PGG2 379 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 M0R296 226 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 CTDSPLO15194 276 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 P2RX6O15547 441 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 ZBTB14O43829 449 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 KINO60870 393 aaKnown RBP4.91□□□□□ -1.62
SMC5-203ENST00000475540 IGHG1P01857 330 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 HPDP32754 393 aaPredicted RBP4.91□□□□□ -1.62
SMC5-203ENST00000475540 SPRP35270 261 aaPredicted RBP4.91□□□□□ -1.62
SMC5-203ENST00000475540 ELK3P41970 407 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 IER3P46695 156 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 PEX3P56589 373 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 FASTKQ14296 549 aaKnown RBP4.91□□□□□ -1.62
SMC5-203ENST00000475540 TEX35Q5T0J7 233 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 ZNF776Q68DI1 518 aaPredicted RBP4.91□□□□□ -1.62
SMC5-203ENST00000475540 PM20D1Q6GTS8 502 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 OTOAQ7RTW8 1153 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 LRRC49Q8IUZ0 686 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 C11orf53Q8IXP5 236 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 TAF4BQ92750 862 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 ATP6V0BQ99437 205 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 MLPHQ9BV36 600 aaPredicted RBP4.91□□□□□ -1.62
SMC5-203ENST00000475540 NMUR1Q9HB89 426 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 IL1RAPL2Q9NP60 686 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 SLCO1C1Q9NYB5 712 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 VPS18Q9P253 973 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 SH3GLB1Q9Y371 365 aa4.91□□□□□ -1.62
SMC5-203ENST00000475540 CCDC162PA2VCL2 907 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 A4D1N5 150 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 SLC30A4O14863 429 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 ZNF354AO60765 605 aaPredicted RBP4.9□□□□□ -1.63
SMC5-203ENST00000475540 OR6B1O95007 311 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 DNAH10OSP0CZ25 163 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 RPL34P49207 117 aaKnown RBP4.9□□□□□ -1.63
SMC5-203ENST00000475540 FKBP1BP68106 108 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 IL1RL1Q01638 556 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 C17orf67Q0P5P2 114 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 CBX3Q13185 183 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 ITPK1Q13572 414 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 GPR50Q13585 617 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 MEP1BQ16820 701 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 ZNF506Q5JVG8 444 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 RNLSQ5VYX0 342 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 BAIAP2L2Q6UXY1 529 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 LCA5Q86VQ0 697 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 NLRP14Q86W24 1093 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 UXS1Q8NBZ7 420 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 C8orf46Q8TAG6 207 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 RCHY1Q96PM5 261 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 PARK7Q99497 189 aaKnown RBP4.9□□□□□ -1.63
SMC5-203ENST00000475540 ABCG4Q9H172 646 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 TNMDQ9H2S6 317 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 S100A14Q9HCY8 104 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 GPR173Q9NS66 373 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 HPF1Q9NWY4 346 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 LEF1Q9UJU2 399 aaPredicted RBP4.9□□□□□ -1.63
SMC5-203ENST00000475540 TMED7Q9Y3B3 224 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 ABCA7Q8IZY2 2146 aa4.9□□□□□ -1.63
SMC5-203ENST00000475540 LOC390937A0A1W2PQ73 354 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 ST8SIA3O43173 380 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 RAD51DO75771 328 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 AZU1P20160 251 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 ACKR3P25106 362 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 MAPK3P27361 379 aaPredicted RBP4.89□□□□□ -1.63
SMC5-203ENST00000475540 CCND3P30281 292 aaPredicted RBP4.89□□□□□ -1.63
SMC5-203ENST00000475540 CD86P42081 329 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 SLC1A6P48664 564 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 HIPK1Q86Z02 1210 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 ZBED8Q8IZ13 594 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 CORO2AQ92828 525 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 RUNDC3BQ96NL0 473 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 THAP9Q9H5L6 903 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 ABCB8Q9NUT2 735 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 SPATA2Q9UM82 520 aa4.89□□□□□ -1.63
SMC5-203ENST00000475540 MRPL11Q9Y3B7 192 aaKnown RBP4.89□□□□□ -1.63
SMC5-203ENST00000475540 TMCO5BA8MYB1 307 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 SEC22BO75396 215 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 LETM1O95202 739 aaPredicted RBP4.88□□□□□ -1.63
SMC5-203ENST00000475540 LYNP07948 512 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 SUPT20HL2P0C7V6 817 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ANPEPP15144 967 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 GAP43P17677 238 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 RPS27AP62979 156 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms