RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 D6RAR5 112 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 ERN1O75460 977 aaKnown RBP11.9□□□□□ -0.5
PCCB-211ENST00000473073 NPPAP01160 153 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 ME2P23368 584 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 ID2Q02363 134 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 LIPEQ05469 1076 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 SQSTM1Q13501 440 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 INAVAQ3KP66 663 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 RUNDC3AQ59EK9 446 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 SAMD4BQ5PRF9 694 aaKnown RBP11.9□□□□□ -0.5
PCCB-211ENST00000473073 CYB5D1Q6P9G0 228 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 ARHGAP22Q7Z5H3 698 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 NAXDQ8IW45 347 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 OR4N5Q8IXE1 308 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 C10orf67Q8IYJ2 551 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 CARFQ8N187 725 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 CA13Q8N1Q1 262 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 VPS37AQ8NEZ2 397 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 CPPED1Q9BRF8 314 aaPredicted RBP11.9□□□□□ -0.5
PCCB-211ENST00000473073 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 TMEM9BQ9NQ34 198 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 FGF21Q9NSA1 209 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 NCDNQ9UBB6 729 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 DHCR7Q9UBM7 475 aaKnown RBP11.9□□□□□ -0.5
PCCB-211ENST00000473073 EGFL7Q9UHF1 273 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 CES1P1Q9UKY3 287 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 CLCA2Q9UQC9 943 aa11.9□□□□□ -0.5
PCCB-211ENST00000473073 WBP11Q9Y2W2 641 aaKnown RBP11.9□□□□□ -0.5
PCCB-211ENST00000473073 ASCC3Q8N3C0 2202 aaKnown RBP11.9□□□□□ -0.5
PCCB-211ENST00000473073 C1orf226A1L170 272 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 TXNDC9O14530 226 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 GUCY1B2O75343 617 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 NTRK1P04629 796 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 DRD2P14416 443 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 SOAT1P35610 550 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
PCCB-211ENST00000473073 BUD31P41223 144 aaPredicted RBP11.89□□□□□ -0.51
PCCB-211ENST00000473073 GSTM5P46439 218 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 MANFP55145 182 aaKnown RBP11.89□□□□□ -0.51
PCCB-211ENST00000473073 CLDN6P56747 220 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 TCTE1Q5JU00 501 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 SLC48A1Q6P1K1 146 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 TTLL10Q6ZVT0 673 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 TTC29Q8NA56 475 aaPredicted RBP11.89□□□□□ -0.51
PCCB-211ENST00000473073 OR10A6Q8NH74 314 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 ZNF501Q96CX3 271 aaPredicted RBP11.89□□□□□ -0.51
PCCB-211ENST00000473073 MMABQ96EY8 250 aaPredicted RBP11.89□□□□□ -0.51
PCCB-211ENST00000473073 CNRIP1Q96F85 164 aaPredicted RBP11.89□□□□□ -0.51
PCCB-211ENST00000473073 ALG2Q9H553 416 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 NDOR1Q9UHB4 597 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 SNX8Q9Y5X2 465 aa11.89□□□□□ -0.51
PCCB-211ENST00000473073 NTN3O00634 580 aaPredicted RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 LDB3O75112 727 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 CDC123O75794 336 aaPredicted RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 ALAS2P22557 587 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 ACP1P24666 158 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 TRPC1P48995 793 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 GSK3BP49841 420 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 PCBP4P57723 403 aaKnown RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 SPIDRQ14159 915 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 GRM7Q14831 915 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 NDUFA9Q16795 377 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 AASDHQ4L235 1098 aaPredicted RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 TMTC4Q5T4D3 741 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 ANGPTL8Q6UXH0 198 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 NET1Q7Z628 596 aaPredicted RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 KMT5CQ86Y97 462 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 SLITRK4Q8IW52 837 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 OR6C1Q96RD1 312 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 TRIM4Q9C037 500 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 GLIPR2Q9H4G4 154 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 RPF2Q9H7B2 306 aaKnown RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 CXorf36Q9H7Y0 433 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 SLC35C2Q9NQQ7 365 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 CUTCQ9NTM9 273 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 EHD3Q9NZN3 535 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 PDP2Q9P2J9 529 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 PHF11Q9UIL8 331 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 COL5A1P20908 1838 aaPredicted RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 C15orf38-AP3S2A0A0A6YYH1 394 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 FITM1A5D6W6 292 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 OR2W5A6NFC9 320 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 CLIC1O00299 241 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 TOX3O15405 576 aaPredicted RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 CHST10O43529 356 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 TBX19O60806 448 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 ANKRD34CP0C6C1 535 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 NCK1P16333 377 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 CDK9P50750 372 aaKnown RBP11.88□□□□□ -0.51
PCCB-211ENST00000473073 NCBP2P52298 156 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCCB-211ENST00000473073 PDX1P52945 283 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 ITGA1P56199 1179 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 OR4D2P58180 307 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 ERV3-1Q14264 604 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 CYP2R1Q6VVX0 501 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 ARPINQ7Z6K5 226 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 CCDC116Q8IYX3 515 aa11.88□□□□□ -0.51
PCCB-211ENST00000473073 GPR135Q8IZ08 494 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms