RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 QPCTLQ9NXS2 382 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 FOXD3Q9UJU5 478 aaPredicted RBP11.23□□□□□ -0.61
UBR4-211ENST00000467272 GUCA1BQ9UMX6 200 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 CHCHD2Q9Y6H1 151 aaPredicted RBP11.23□□□□□ -0.61
UBR4-211ENST00000467272 ANK2Q01484 3957 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 A0A0G2JN53 185 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 KIAA1324LA8MWY0 1029 aaPredicted RBP11.22□□□□□ -0.61
UBR4-211ENST00000467272 ERI3O43414 337 aaKnown RBP11.22□□□□□ -0.61
UBR4-211ENST00000467272 CLEC3AO75596 197 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 GUCA1CO95843 209 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 C1GALT1C1LP0DN25 315 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 PGAM1P18669 254 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 UQCRC1P31930 480 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 ZNF136P52737 540 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 TERF1P54274 439 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 RBBP5Q15291 538 aaKnown RBP11.22□□□□□ -0.61
UBR4-211ENST00000467272 CYP1B1Q16678 543 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 TMEM198Q66K66 360 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 TMIGD1Q6UXZ0 262 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 CLNKQ7Z7G1 428 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 TMPRSS11BQ86T26 416 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 IGDCC3Q8IVU1 814 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 C9orf40Q8IXQ3 194 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 TTLQ8NG68 377 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 OR5L2Q8NGL0 311 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 NUBPLQ8TB37 319 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 ANKRD9Q96BM1 317 aaPredicted RBP11.22□□□□□ -0.61
UBR4-211ENST00000467272 WDR34Q96EX3 536 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 SERINC2Q96SA4 455 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 ALOXE3Q9BYJ1 711 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 PRDM14Q9GZV8 571 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 ZNF490Q9ULM2 529 aaPredicted RBP11.22□□□□□ -0.61
UBR4-211ENST00000467272 VWA7Q9Y334 891 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 KCNE2Q9Y6J6 123 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 IKBKGQ9Y6K9 419 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 CLCA3PQ9Y6N3 262 aa11.22□□□□□ -0.61
UBR4-211ENST00000467272 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.22□□□□□ -0.61
UBR4-211ENST00000467272 AHRRA9YTQ3 701 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 CDC7O00311 574 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 DVL2O14641 736 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 B3GALT2O43825 422 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 TRIM3O75382 744 aaPredicted RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 SCELO95171 688 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 HRGP04196 525 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 P04436 131 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 BMP5P22003 454 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 TACR1P25103 407 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 SORDQ00796 357 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 CRYZQ08257 329 aaKnown RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 BMPR2Q13873 1038 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 E2F2Q14209 437 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 EFTUD2Q15029 972 aaKnown RBP eCLIP11.21□□□□□ -0.611e-10■■■■■ 27.9
UBR4-211ENST00000467272 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 TEDDM1Q5T9Z0 273 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 RNASEH2BQ5TBB1 312 aaKnown RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 ADNP2Q6IQ32 1131 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 CHSY3Q70JA7 882 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 Q71RC1 249 aaPredicted RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 MAATS1Q7Z4T9 603 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 RASGEF1CQ8N431 466 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 SLC15A4Q8N697 577 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 GPATCH11Q8N954 259 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 KIAA1191Q96A73 305 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 FAR2Q96K12 515 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 COX4I2Q96KJ9 171 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 WDR83Q9BRX9 315 aaKnown RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 TRIM54Q9BYV2 358 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 OR8D2Q9GZM6 311 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 UBQLN3Q9H347 655 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 EHD1Q9H4M9 534 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 LYRM4Q9HD34 91 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 BEX4Q9NWD9 120 aaPredicted RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 SLC17A6Q9P2U8 582 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 CNOT11Q9UKZ1 510 aaKnown RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 MRPS33Q9Y291 106 aaKnown RBP11.21□□□□□ -0.61
UBR4-211ENST00000467272 DYRK1BQ9Y463 629 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 MAD1L1Q9Y6D9 718 aa11.21□□□□□ -0.61
UBR4-211ENST00000467272 HIVEP2P31629 2446 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 ANKRD33BA6NCL7 494 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 C17orf105B2RV13 164 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 NRDCO43847 1150 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 WISP3O95389 354 aaPredicted RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 TTC4O95801 387 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 FBXO45P0C2W1 286 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 ZNF37AP17032 561 aaPredicted RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 GNAZP19086 355 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 CERS1P27544 350 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 GGT5P36269 586 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 GDF5P43026 501 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 HNMTP50135 292 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 MTTPP55157 894 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 WNT3P56703 355 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 TBL3Q12788 808 aaKnown RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 SLBPQ14493 270 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBR4-211ENST00000467272 C18orf21Q32NC0 220 aaPredicted RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 NHSL2Q5HYW2 709 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 FNDC7Q5VTL7 733 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 SLC22A10Q63ZE4 541 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 NSUN5P2Q63ZY6 315 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms