RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 PRR22Q8IZ63 422 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 KIAA0895Q8NCT3 520 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 PCNPQ8WW12 178 aaKnown RBP2.75□□□□□ -1.97
USP9X-206ENST00000467173 PNPLA2Q96AD5 504 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 ERO1AQ96HE7 468 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 FERMT1Q9BQL6 677 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 ZNF559Q9BR84 538 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 AP1M1Q9BXS5 423 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 EDEM3Q9BZQ6 932 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 MTIF3Q9H2K0 278 aaKnown RBP2.75□□□□□ -1.97
USP9X-206ENST00000467173 ZCCHC17Q9NP64 241 aaKnown RBP2.75□□□□□ -1.97
USP9X-206ENST00000467173 GPR173Q9NS66 373 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 PSORS1C1Q9UIG5 152 aa2.75□□□□□ -1.97
USP9X-206ENST00000467173 ARHGEF37A1IGU5 675 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 KBTBD13C9JR72 458 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 CDX4O14627 284 aaPredicted RBP2.74□□□□□ -1.97
USP9X-206ENST00000467173 TIMM44O43615 452 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 RLN1P04808 185 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 SKILP12757 684 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 FOSL2P15408 326 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 CCND3P30281 292 aaPredicted RBP2.74□□□□□ -1.97
USP9X-206ENST00000467173 IER3P46695 156 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 FASTKQ14296 549 aaKnown RBP2.74□□□□□ -1.97
USP9X-206ENST00000467173 RFTN2Q52LD8 501 aaPredicted RBP2.74□□□□□ -1.97
USP9X-206ENST00000467173 SERINC5Q86VE9 423 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 NHLRC2Q8NBF2 726 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 PARK7Q99497 189 aaKnown RBP2.74□□□□□ -1.97
USP9X-206ENST00000467173 RBM24Q9BX46 236 aaKnown RBP2.74□□□□□ -1.97
USP9X-206ENST00000467173 TNMDQ9H2S6 317 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 NT5DC2Q9H857 520 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 MED17Q9NVC6 651 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 MIS18AQ9NYP9 233 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 ABCD2Q9UBJ2 740 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 GMEB2Q9UKD1 530 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 MRPL11Q9Y3B7 192 aaKnown RBP2.74□□□□□ -1.97
USP9X-206ENST00000467173 POMT1Q9Y6A1 747 aa2.74□□□□□ -1.97
USP9X-206ENST00000467173 SH3PXD2BA1X283 911 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 SAP18O00422 153 aaKnown RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 CSO75390 466 aaKnown RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 CSDE1O75534 798 aaKnown RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 OR9G9P0C7N8 305 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 NPBWR1P48145 328 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 ADARP55265 1226 aaKnown RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 RPL27P61353 136 aaKnown RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 SLC17A1Q14916 467 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 ZNF79Q15937 498 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 TIMM50Q3ZCQ8 353 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 IQCCQ4KMZ1 466 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 SLC22A6Q4U2R8 563 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 C2orf83Q53S99 150 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 VWA2Q5GFL6 755 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 LYPLAL1Q5VWZ2 237 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 CAPN13Q6MZZ7 669 aaPredicted RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 ARMCX5Q6P1M9 558 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 METTL23Q86XA0 190 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 CHDHQ8NE62 594 aaPredicted RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 OR4F5Q8NH21 305 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 SETD6Q8TBK2 473 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 SNRNP27Q8WVK2 155 aaKnown RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 NUS1Q96E22 293 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 SDHCQ99643 169 aaPredicted RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 NACAP1Q9BZK3 213 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 ASB8Q9H765 288 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 NMUR1Q9HB89 426 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 PDFQ9HBH1 243 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 S100A14Q9HCY8 104 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 RCOR3Q9P2K3 495 aaPredicted RBP2.73□□□□□ -1.97
USP9X-206ENST00000467173 GTF3C4Q9UKN8 822 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 OR1A2Q9Y585 309 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 CPQQ9Y646 472 aa2.73□□□□□ -1.97
USP9X-206ENST00000467173 A0A087X0K7 114 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 C2orf92A0A1B0GVN3 265 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 BCLAF3A2AJT9 711 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 SUPT20HL2P0C7V6 817 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 RPL9P32969 192 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 SPRP35270 261 aaPredicted RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 MTIF2P46199 727 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 SLC1A6P48664 564 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 IST1P53990 364 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 AGAP6Q5VW22 663 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 ZNF730Q6ZMV8 503 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 ITIH5Q86UX2 942 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 DZIP1Q86YF9 867 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 NME8Q8N427 588 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 CLEC1AQ8NC01 280 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 RNF149Q8NC42 400 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 CKAP2Q8WWK9 683 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 SNRNP40Q96DI7 357 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 PCED1BQ96HM7 432 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 EPSTI1Q96J88 318 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 CDHR1Q96JP9 859 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 ZMAT2Q96NC0 199 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 MCCC1Q96RQ3 725 aaPredicted RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 NUSAP1Q9BXS6 441 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 TEX13BQ9BXU2 312 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 ZBP1Q9H171 429 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 SRD5A3Q9H8P0 318 aa2.72□□□□□ -1.97
USP9X-206ENST00000467173 TDRD6O60522 2096 aaKnown RBP2.72□□□□□ -1.97
USP9X-206ENST00000467173 NEDD8-MDP1E9PL57 170 aa2.71□□□□□ -1.98
USP9X-206ENST00000467173 IFIT3O14879 490 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms