RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ERVK-11Q9UQG0 969 aa5.38□□□□□ -1.55
NCL-208ENST00000466274 DRG1Q9Y295 367 aaKnown RBP5.38□□□□□ -1.55
NCL-208ENST00000466274 MGAM2Q2M2H8 2515 aa5.38□□□□□ -1.55
NCL-208ENST00000466274 HRNRQ86YZ3 2850 aaPredicted RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 LOC105369274A0A096LPK9 316 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 A0A0A6YYC8 382 aaPredicted RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 A0A0A6YYJ9 748 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 A0A0A6YYK5 440 aaPredicted RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 LOC102723532A0A0G2JNH3 316 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 A0A0U1RQJ8 604 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 C2orf81A6NN90 581 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 H0YIG0 161 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 I3L1I5 382 aaPredicted RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 GPR39O43194 453 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 CTIFO43310 598 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 CTSVO60911 334 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 SRP72O76094 671 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 GFPT2O94808 682 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 MATN4O95460 622 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 SPTBP11277 2137 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 UCHL3P15374 230 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 CD9P21926 228 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 IL10P22301 178 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 PEBP1P30086 187 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 PKLRP30613 574 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 CYLC1P35663 651 aaPredicted RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 DIO3P55073 304 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 MTTPP55157 894 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 CASP9P55211 416 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 ADARP55265 1226 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 OR4D2P58180 307 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 SLC26A5P58743 744 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 RPS4XP62701 263 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 OGDHQ02218 1023 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 FAM53BQ14153 422 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 SYTL3Q4VX76 610 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 MIDNQ504T8 468 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 DNAJC21Q5F1R6 531 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 CCDC183Q5T5S1 534 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 CYB5R2Q6BCY4 276 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 FRMPD2BQ6IN97 320 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 TTC23LQ6PF05 361 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 ABHD13Q7L211 337 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 PM20D2Q8IYS1 436 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 OR4N4Q8N0Y3 316 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 TNIP2Q8NFZ5 429 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 OR2M7Q8NG81 312 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 KIAA1191Q96A73 305 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 IMP4Q96G21 291 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 CAPZA3Q96KX2 299 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 QRFPRQ96P65 431 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 FAM173AQ9BQD7 235 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 RHNO1Q9BSD3 238 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 SOX7Q9BT81 388 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 CNPPD1Q9BV87 410 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 SLC25A51Q9H1U9 297 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 ESRP2Q9H6T0 727 aaKnown RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 ING3Q9NXR8 418 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 JKAMPQ9P055 326 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 ARMCX1Q9P291 453 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 STOX2Q9P2F5 926 aaPredicted RBP5.37□□□□□ -1.55
NCL-208ENST00000466274 SLC39A10Q9ULF5 831 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 PLAGL1Q9UM63 463 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 SPO11Q9Y5K1 396 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 KLK4Q9Y5K2 254 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 DOCK10Q96BY6 2186 aa5.37□□□□□ -1.55
NCL-208ENST00000466274 ATP6AP2A0A1C7CYW4 349 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 A8MVJ9 347 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 F8W8V4 182 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 H0YGG7 62 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 SLC16A5O15375 505 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 SGTAO43765 313 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 LMX1BO60663 402 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ITGA10O75578 1167 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ATP6AP2O75787 350 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 DNAJC8O75937 253 aaPredicted RBP5.36□□□□□ -1.55
NCL-208ENST00000466274 GLSO94925 669 aaPredicted RBP5.36□□□□□ -1.55
NCL-208ENST00000466274 AP2A2O94973 939 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 NUDT3O95989 172 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 EPOP01588 193 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 PKMP14618 531 aaKnown RBP5.36□□□□□ -1.55
NCL-208ENST00000466274 CHRNB2P17787 502 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ITGALP20701 1170 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 CNR1P21554 472 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ACADLP28330 430 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 MAGEA5P43359 124 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 SSR4P51571 173 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ZNF136P52737 540 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ARF3P61204 181 aaPredicted RBP5.36□□□□□ -1.55
NCL-208ENST00000466274 MAMLD1Q13495 774 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ABRAXAS2Q15018 415 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 PAFAH1B3Q15102 231 aaKnown RBP5.36□□□□□ -1.55
NCL-208ENST00000466274 SYT16Q17RD7 645 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 ACSF3Q4G176 576 aaPredicted RBP5.36□□□□□ -1.55
NCL-208ENST00000466274 ISM2Q6H9L7 571 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 LRRC8BQ6P9F7 803 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 SUSD1Q6UWL2 747 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 KIAA0408Q6ZU52 694 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 SEM1Q6ZVN7 128 aa5.36□□□□□ -1.55
NCL-208ENST00000466274 RNF44Q7L0R7 432 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms