RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 OR8D2Q9GZM6 311 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 IPPKQ9H8X2 491 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 YARS2Q9Y2Z4 477 aaKnown RBP24.06■■□□□ 1.44
U2AF1-206ENST00000464750 TEX15Q9BXT5 2789 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 C17orf105B2RV13 164 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 H0YIV9 168 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 SLAMF1Q13291 335 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 CPSF6Q16630 551 aaKnown RBP eCLIP24.05■■□□□ 1.44
U2AF1-206ENST00000464750 RNFT1Q5M7Z0 435 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 HSDL2Q6YN16 418 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 POGLUT1Q8NBL1 392 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 UHMK1Q8TAS1 419 aaKnown RBP24.05■■□□□ 1.44
U2AF1-206ENST00000464750 SREK1Q8WXA9 508 aaKnown RBP24.05■■□□□ 1.44
U2AF1-206ENST00000464750 ANKRD9Q96BM1 317 aaPredicted RBP24.05■■□□□ 1.44
U2AF1-206ENST00000464750 SCYL1Q96KG9 808 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 LIN28AQ9H9Z2 209 aaKnown RBP24.05■■□□□ 1.44
U2AF1-206ENST00000464750 XPR1Q9UBH6 696 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 TINAGQ9UJW2 476 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 CRYBG3Q68DQ2 2970 aa24.05■■□□□ 1.44
U2AF1-206ENST00000464750 TMEM200CA6NKL6 621 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 POC1B-GALNT4F8VUJ3 575 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 ASNA1O43681 348 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 FGF17O60258 216 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 OR2J2O76002 312 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 RBP1P09455 135 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 METTL2BQ6P1Q9 378 aaKnown RBP24.04■■□□□ 1.44
U2AF1-206ENST00000464750 MTFR2Q6P444 385 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 MDGA2Q7Z553 956 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 SULF2Q8IWU5 870 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 GHDCQ8N2G8 530 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 ZCCHC7Q8N3Z6 543 aaKnown RBP24.04■■□□□ 1.44
U2AF1-206ENST00000464750 ZNF321PQ8N8H1 164 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 SLC2A12Q8TD20 617 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 ITLN2Q8WWU7 325 aaPredicted RBP24.04■■□□□ 1.44
U2AF1-206ENST00000464750 MS4A12Q9NXJ0 267 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 MYOTQ9UBF9 498 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 PHF11Q9UIL8 331 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 ERVK-11Q9UQG0 969 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 ZNF835Q9Y2P0 537 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 RNF11Q9Y3C5 154 aa24.04■■□□□ 1.44
U2AF1-206ENST00000464750 NCOA6Q14686 2063 aaPredicted RBP24.03■■□□□ 1.44
U2AF1-206ENST00000464750 A8MVJ9 347 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 KLRC4-KLRK1H3BQV0 150 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 KRT38O76015 456 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 ARL1P40616 181 aaPredicted RBP24.03■■□□□ 1.44
U2AF1-206ENST00000464750 HSF1Q00613 529 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 TNFRSF17Q02223 184 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 TSNAXIP1Q2TAA8 658 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 GPR180Q86V85 440 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 SPPL2CQ8IUH8 684 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 OR4N5Q8IXE1 308 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 L3MBTL4Q8NA19 623 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 DCAKDQ8WVC6 231 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 ASB15Q8WXK1 588 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 PHF21BQ96EK2 531 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 RPF2Q9H7B2 306 aaKnown RBP24.03■■□□□ 1.44
U2AF1-206ENST00000464750 NOL11Q9H8H0 719 aaKnown RBP24.03■■□□□ 1.44
U2AF1-206ENST00000464750 HPF1Q9NWY4 346 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 TMCO1Q9UM00 188 aa24.03■■□□□ 1.44
U2AF1-206ENST00000464750 ITPR2Q14571 2701 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 A0A087WUV0 522 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 PRSS44E7EML9 344 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 KIF2AO00139 706 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 WWP2O00308 870 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 TFECO14948 347 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 PEX1O43933 1283 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 TUBB4AP04350 444 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 COX7A2P14406 83 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 PTX3P26022 381 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 CNTFP26441 200 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 RFC3P40938 356 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 STT3AP46977 705 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 HK2P52789 917 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 ARFIP1P53367 373 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 HNRNPH2P55795 449 aaKnown RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 GPR85P60893 370 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 IGLV3-21P80748 117 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 C18orf63Q68DL7 685 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 Q6ZPB1 254 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 GPALPP1Q8IXQ4 340 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 C7orf57Q8NEG2 295 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 WDR20Q8TBZ3 569 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 DGAT2Q96PD7 388 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 CDK15Q96Q40 435 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 RASL10BQ96S79 203 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 ZNF717Q9BY31 904 aaPredicted RBP24.02■■□□□ 1.44
U2AF1-206ENST00000464750 TIMMDC1Q9NPL8 285 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 ZNF180Q9UJW8 692 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 ATG4BQ9Y4P1 393 aa24.02■■□□□ 1.44
U2AF1-206ENST00000464750 TRIM49D1C9J1S8 452 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 STX16-NPEPL1H3BU86 382 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 OR7A17O14581 309 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 STX16O14662 325 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 SMIM24O75264 130 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 EEDO75530 441 aaKnown RBP24.01■■□□□ 1.43
U2AF1-206ENST00000464750 PRKRAO75569 313 aaKnown RBP24.01■■□□□ 1.43
U2AF1-206ENST00000464750 OR6B1O95007 311 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 CLDN9O95484 217 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 ETHE1O95571 254 aa24.01■■□□□ 1.43
U2AF1-206ENST00000464750 ABOP16442 354 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms