RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 C2CD6Q53TS8 623 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 RAB12Q6IQ22 244 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 TATDN1Q6P1N9 297 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 ZFAND4Q86XD8 727 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 URGCPQ8TCY9 931 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 TCP11Q8WWU5 503 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 GTF3AQ92664 365 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 TAF15Q92804 592 aaKnown RBP eCLIP3.44□□□□□ -1.86
CLK1-208ENST00000464454 GLYATL1Q969I3 302 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 AGPAT1Q99943 283 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 SPXQ9BT56 116 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 TRPV6Q9H1D0 765 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 DCLRE1BQ9H816 532 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 FAM212BQ9NTI7 297 aaPredicted RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 PIGVQ9NUD9 493 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 DDX28Q9NUL7 540 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 FETUBQ9UGM5 382 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 MRPS2Q9Y399 296 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 STRAPQ9Y3F4 350 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 MEX3AA1L020 520 aaKnown RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 CYSRT1A8MQ03 144 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 A8MU76 341 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 E9PQ18 207 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 G3V2L1 256 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CHEK1O14757 476 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 IDH3BO43837 385 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 KIAA0513O60268 411 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 OR6A2O95222 327 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CXCL14O95715 111 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CALCAP01258 141 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 SERPINF2P08697 491 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 TPBGLP0DKB5 382 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 GPX3P22352 226 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 GLRA1P23415 457 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 FCGR2BP31994 310 aaPredicted RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 FCGR2CP31995 323 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 ALDH3B1P43353 468 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CRYBA2P53672 197 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CASP9P55211 416 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CCZ1BP86790 482 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CCZ1P86791 482 aaPredicted RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 WASHC5Q12768 1159 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CALCOCO2Q13137 446 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 KIAA0141Q14154 515 aaPredicted RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 OR1C1Q15619 314 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 SLC1A5Q15758 541 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 MPPE1Q53F39 396 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 TAF1BQ53T94 588 aaPredicted RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 C1orf189Q5VU69 101 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 DOK6Q6PKX4 331 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 MIER3Q7Z3K6 550 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 TBC1D10CQ8IV04 446 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 OR4N5Q8IXE1 308 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 BATF2Q8N1L9 274 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 OR6M1Q8NGM8 313 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 OR4L1Q8NH43 312 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 EXOC6Q8TAG9 804 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 C11orf45Q8TAV5 145 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 GOLGA5Q8TBA6 731 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 SPPL2AQ8TCT8 520 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 LIPHQ8WWY8 451 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 DTD2Q96FN9 168 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CXorf58Q96LI9 332 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 SPATA13Q96N96 652 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 ALKBH3Q96Q83 286 aaPredicted RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 ATOH8Q96SQ7 321 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 LGMNQ99538 433 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 SPAG8Q99932 426 aaPredicted RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 DDX47Q9H0S4 455 aaKnown RBP3.43□□□□□ -1.86
CLK1-208ENST00000464454 ABCG4Q9H172 646 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 ABCG8Q9H221 673 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 TNMDQ9H2S6 317 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 MMP24Q9Y5R2 645 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 CACNA1FO60840 1977 aa3.43□□□□□ -1.86
CLK1-208ENST00000464454 IGKV3D-20A0A0C4DH25 116 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 IGHV3-20A0A0C4DH32 117 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 MACROD2A1Z1Q3 448 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 SHISA7A6NL88 538 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 YJEFN3A6XGL0 299 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 EEF2KO00418 725 aaKnown RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 TXNDC12O95881 172 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 AHCYP23526 432 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 FCARP24071 287 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 TAF6P49848 677 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 HNRNPFP52597 415 aaKnown RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 SLC12A3P55017 1021 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 HERV-K104P63124 156 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 HSPA14Q0VDF9 509 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 ELAVL2Q12926 359 aaKnown RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 RIGQ13278 110 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 MSLNQ13421 630 aaPredicted RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 NFATC2Q13469 925 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 TRADDQ15628 312 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 MLF2Q15773 248 aaPredicted RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 LPAL2Q16609 132 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 UPP1Q16831 310 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 MS4A18Q3C1V0 323 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 DLEU7Q6UYE1 221 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms