RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PCNAP12004 261 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 MTHFD2P13995 350 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 TNNI3P19429 210 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 GMPRP36959 345 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 SSR2P43308 183 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 HK2P52789 917 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 RNF4P78317 190 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 TRADDQ15628 312 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 FAM83EQ2M2I3 478 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 ARHGAP11AQ6P4F7 1023 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 PAOXQ6QHF9 649 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 CENPLQ8N0S6 344 aaPredicted RBP13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 SLC2A12Q8TD20 617 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 RGMAQ96B86 450 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 ANKRD9Q96BM1 317 aaPredicted RBP13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 NXNL1Q96CM4 212 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 CENPKQ9BS16 269 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 OR8D2Q9GZM6 311 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 DEPPQ9NTK1 212 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 RYDENQ9NUL5 291 aaKnown RBP13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 PPT2Q9UMR5 302 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 TEP1Q99973 2627 aaKnown RBP13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 WWP2O00308 870 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 RTCAO00442 366 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 UGDHO60701 494 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 LDB3O75112 727 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 OR6B1O95007 311 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 COX7A2P14406 83 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 CPN2P22792 545 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 ELAVL4P26378 380 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 RFC3P40938 356 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 SOX3P41225 446 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 STT3AP46977 705 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 GPR85P60893 370 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 SETDB1Q15047 1291 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 ACAP2Q15057 778 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 CDSNQ15517 529 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 MPEG1Q2M385 716 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 NDUFAF5Q5TEU4 345 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 LIPJQ5W064 366 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 TMEM211Q6ICI0 200 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 OR4C11Q6IEV9 310 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 METTL2BQ6P1Q9 378 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 IL20RBQ6UXL0 311 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 C16orf47Q6ZP98 133 aaPredicted RBP13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 RTL4Q6ZR62 310 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 ZCCHC7Q8N3Z6 543 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 GOLM1Q8NBJ4 401 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 ACBD4Q8NC06 268 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 OR2M7Q8NG81 312 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 HUS1BQ8NHY5 278 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 TANKQ92844 425 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 SPOCK3Q9BQ16 436 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 OR51B5Q9H339 312 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 LIN28AQ9H9Z2 209 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 PSD3Q9NYI0 1048 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 COPS7AQ9UBW8 275 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 PHF11Q9UIL8 331 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 PCDHGA11Q9Y5H2 935 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF407Q9C0G0 2248 aa13.32□□□□□ -0.28
SNRNP40-203ENST00000463988 ADGRG4Q8IZF6 3080 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 DNAJC13O75165 2243 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 HMX2A2RU54 273 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 H0YIV9 168 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ACOT7O00154 380 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNHIT1O43257 154 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 DYRK3O43781 588 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 KLK8O60259 260 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 CDC40O60508 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 GLSO94925 669 aaPredicted RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ETHE1O95571 254 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 C2P06681 752 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 TPOP07202 933 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 CNR1P21554 472 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 PTX3P26022 381 aaPredicted RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 TLX1P31314 330 aaPredicted RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ALDH18A1P54886 795 aaKnown RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 PPIAP62937 165 aaKnown RBP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 SLAMF1Q13291 335 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 PCBP2Q15366 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 MROH9Q5TGP6 573 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 OPN5Q6U736 354 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 C3P1Q6ZMU1 363 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 GK5Q6ZS86 529 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 GPR180Q86V85 440 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 CD163Q86VB7 1156 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 SLC22A16Q86VW1 577 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF321PQ8N8H1 164 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 OR52N2Q8NGI0 321 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 NUBPLQ8TB37 319 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF721Q8TF20 911 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 CA5BP1Q8WTZ4 195 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 KCTD4Q8WVF5 259 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 REPS1Q96D71 796 aa13.31□□□□□ -0.28
SNRNP40-203ENST00000463988 SCYL1Q96KG9 808 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms