RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ZNF750Q32MQ0 723 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 ZNF585AQ6P3V2 769 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 ABHD17CQ6PCB6 329 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 B3GNT6Q6ZMB0 384 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 CAPN12Q6ZSI9 719 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 TRILQ7L0X0 811 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 ZC3HC1Q86WB0 502 aaKnown RBP18.33■□□□□ 0.52
VARS-221ENST00000463184 FAM109AQ8N4B1 249 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 EIF1ADQ8N9N8 165 aaKnown RBP18.33■□□□□ 0.52
VARS-221ENST00000463184 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 OR5M9Q8NGP3 310 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 PTPMT1Q8WUK0 201 aaPredicted RBP18.33■□□□□ 0.52
VARS-221ENST00000463184 MTORP42345 2549 aa18.33■□□□□ 0.52
VARS-221ENST00000463184 A0A0G2JMM0 328 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 FAM95CA0A1B0GW59 222 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 A0A1W2PPB8 328 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 A0A1W2PRS3 328 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 KIR3DP1A8MWS1 328 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 AQP7O14520 342 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 ZWINTO95229 277 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 TBX6O95947 436 aaPredicted RBP18.32■□□□□ 0.52
VARS-221ENST00000463184 DNAJA1P31689 397 aaKnown RBP18.32■□□□□ 0.52
VARS-221ENST00000463184 TGM3Q08188 693 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 STX4Q12846 297 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 ZNF460Q14592 562 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 TSNQ15631 228 aaKnown RBP18.32■□□□□ 0.52
VARS-221ENST00000463184 C18orf21Q32NC0 220 aaPredicted RBP18.32■□□□□ 0.52
VARS-221ENST00000463184 TMEM251Q8N6I4 163 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 OR5L2Q8NGL0 311 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 KIAA1191Q96A73 305 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 VPS39Q96JC1 886 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 SCYL1Q96KG9 808 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 CSF3RQ99062 836 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 EHD1Q9H4M9 534 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 COPS7BQ9H9Q2 264 aaPredicted RBP18.32■□□□□ 0.52
VARS-221ENST00000463184 SACM1LQ9NTJ5 587 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 NSMCE4AQ9NXX6 385 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 PSAT1Q9Y617 370 aa18.32■□□□□ 0.52
VARS-221ENST00000463184 G3V3Y1 287 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 CLGNO14967 610 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 SUSD5O60279 629 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 GLI4P10075 376 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 TNNI3P19429 210 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 CERS1P27544 350 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 MAGEA5P43359 124 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 TAS2R39P59534 338 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 RNF4P78317 190 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 SERTAD2Q14140 314 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 SLC10A1Q14973 349 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 TGFBIQ15582 683 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 HYAL4Q2M3T9 481 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 OPN5Q6U736 354 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 FAM47EQ6ZV65 393 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 VN1R5Q7Z5H4 357 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 TCAIMQ8N3R3 496 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 C7orf57Q8NEG2 295 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 ANKRD49Q8WVL7 239 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 CDKL2Q92772 493 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 OR8D2Q9GZM6 311 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 PRDM7Q9NQW5 492 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 ACAD8Q9UKU7 415 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 FAM215AQ9Y5M1 114 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 LIPGQ9Y5X9 500 aa18.31■□□□□ 0.52
VARS-221ENST00000463184 TCRBV9S1A1TA0A576 114 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 C17orf105B2RV13 164 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 WDR1O75083 606 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 P04436 131 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 GGT5P36269 586 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 MAN2A2P49641 1150 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 IST1P53990 364 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 SLMAPQ14BN4 828 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 RTL6Q6ICC9 239 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 SRFBP1Q8NEF9 429 aaKnown RBP18.3■□□□□ 0.52
VARS-221ENST00000463184 SLC2A12Q8TD20 617 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 SARAFQ96BY9 339 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 PTCD3Q96EY7 689 aaKnown RBP18.3■□□□□ 0.52
VARS-221ENST00000463184 ROGDIQ9GZN7 287 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 LDAHQ9H6V9 325 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 CNOT10Q9H9A5 744 aaKnown RBP18.3■□□□□ 0.52
VARS-221ENST00000463184 POPDC3Q9HBV1 291 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 LYRM4Q9HD34 91 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 DNAJC11Q9NVH1 559 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 NINJ2Q9NZG7 142 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 ZNF490Q9ULM2 529 aaPredicted RBP18.3■□□□□ 0.52
VARS-221ENST00000463184 NF1P21359 2839 aa18.3■□□□□ 0.52
VARS-221ENST00000463184 A0A0G2JNJ9 132 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 MYOCOSA0A1B0GUC4 107 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 FAM221AA4D161 298 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 NCF1BA6NI72 391 aaPredicted RBP18.29■□□□□ 0.52
VARS-221ENST00000463184 NCF1CA8MVU1 366 aaPredicted RBP18.29■□□□□ 0.52
VARS-221ENST00000463184 FAM47E-STBD1D6RA91 191 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 CD99P14209 185 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 NCF1P14598 390 aaPredicted RBP18.29■□□□□ 0.52
VARS-221ENST00000463184 STX2P32856 288 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 KCNC1P48547 511 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 FOXO1Q12778 655 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 ILF2Q12905 390 aaKnown RBP18.29■□□□□ 0.52
VARS-221ENST00000463184 MPEG1Q2M385 716 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 SLC25A35Q3KQZ1 300 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 CDKL4Q5MAI5 379 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms