RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 CIDECQ96AQ7 238 aaPredicted RBP12.7□□□□□ -0.38
PBRM1-219ENST00000462207 TESCQ96BS2 214 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 PPCDCQ96CD2 204 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 MAP4K5Q9Y4K4 846 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 PCDHGA3Q9Y5H0 932 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 CNOT3O75175 753 aaKnown RBP12.7□□□□□ -0.38
PBRM1-219ENST00000462207 GUCY1B2O75343 617 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 HBQ1P09105 142 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 PTGER1P34995 402 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 GSTM5P46439 218 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 CPA2P48052 419 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 EFNA3P52797 238 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 KCNK10P57789 538 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 IRX1P78414 480 aaPredicted RBP12.7□□□□□ -0.38
PBRM1-219ENST00000462207 DCDP81605 110 aaKnown RBP12.7□□□□□ -0.38
PBRM1-219ENST00000462207 FOXC1Q12948 553 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 VWA2Q5GFL6 755 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 SLC48A1Q6P1K1 146 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 SHISA6Q6ZSJ9 500 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 TIPARPQ7Z3E1 657 aaKnown RBP12.7□□□□□ -0.38
PBRM1-219ENST00000462207 TBC1D20Q96BZ9 403 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 SPDL1Q96EA4 605 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 ASPSCR1Q9BZE9 553 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 RPF2Q9H7B2 306 aaKnown RBP12.7□□□□□ -0.38
PBRM1-219ENST00000462207 POLR1BQ9H9Y6 1135 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 SLAMF7Q9NQ25 335 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 MS4A12Q9NXJ0 267 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 CES1P1Q9UKY3 287 aa12.7□□□□□ -0.38
PBRM1-219ENST00000462207 C1orf226A1L170 272 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 TGFBR3LH3BV60 316 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 FBP2O00757 339 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 SLC22A2O15244 555 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 FGF17O60258 216 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 LDB3O75112 727 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 ERAL1O75616 437 aaKnown RBP12.69□□□□□ -0.38
PBRM1-219ENST00000462207 DLGAP3O95886 979 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 FHP07954 510 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 C8orf89P0DMQ9 161 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 COX4I1P13073 169 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 DRD2P14416 443 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 SPINK2P20155 84 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 ADSLP30566 484 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-219ENST00000462207 S100A3P33764 101 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 WNT3P56703 355 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 BTG2P78543 158 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 PLIN5Q00G26 463 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 DUSP2Q05923 314 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 CPTPQ5TA50 214 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 FBXW10Q5XX13 1052 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 OR52E8Q6IFG1 317 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 ANKRD46Q86W74 232 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 GLB1L3Q8NCI6 653 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-219ENST00000462207 DNAJB14Q8TBM8 379 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 MR1Q95460 341 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 KLHL29Q96CT2 875 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 ZPBPQ9BS86 351 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 SPRY4Q9C004 299 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 CHST8Q9H2A9 424 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 CXorf56Q9H5V9 222 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 LANCL2Q9NS86 450 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 IFT80Q9P2H3 777 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-219ENST00000462207 UTS2RQ9UKP6 389 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 WBP11Q9Y2W2 641 aaKnown RBP12.69□□□□□ -0.38
PBRM1-219ENST00000462207 PCDHGA8Q9Y5G5 932 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 SPACA6W5XKT8 324 aa12.69□□□□□ -0.38
PBRM1-219ENST00000462207 CCDC154A6NI56 674 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 PGRP06401 933 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 SNRPB2P08579 225 aaKnown RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 TLX1P31314 330 aaPredicted RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 KIR3DL1P43629 444 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 FOLH1Q04609 750 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 ACTN3Q08043 901 aaPredicted RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 SPRED3Q2MJR0 410 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 FAM69BQ5VUD6 431 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 SLC2A7Q6PXP3 512 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 R3HCC1LQ7Z5L2 792 aaKnown RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 CAMKMTQ7Z624 323 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 CLECL1Q8IZS7 167 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 STARD8Q92502 1023 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 COQ8BQ96D53 544 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 MTERF3Q96E29 417 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 CNRIP1Q96F85 164 aaPredicted RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 LRFN5Q96NI6 719 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 DUSP26Q9BV47 211 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 WDR41Q9HAD4 459 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 CLK4Q9HAZ1 481 aaKnown RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 KLK13Q9UKR3 277 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 SCN2AQ99250 2005 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 SDK2Q58EX2 2172 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 BMP10O95393 424 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 T-ENOLP0DO92 83 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 MAOAP21397 527 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 SLC5A2P31639 672 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 FEN1P39748 380 aaKnown RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 CAMK2BQ13554 666 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 CYLC2Q14093 348 aaPredicted RBP12.68□□□□□ -0.38
PBRM1-219ENST00000462207 KRT72Q14CN4 511 aa12.68□□□□□ -0.38
PBRM1-219ENST00000462207 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms