RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 A0A1W2PPC1 479 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ZNF208O43345 1280 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RDH16O75452 317 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 IFNA5P01569 189 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ITPKAP23677 461 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 CDK2P24941 298 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 LEPRP48357 1165 aaKnown RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 FGFBP1Q14512 234 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 UGT8Q16880 541 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 IRAK1BP1Q5VVH5 260 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SLC7A5P1Q8MH63 180 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 KDM1BQ8NB78 822 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ZNF461Q8TAF7 563 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SCGB1C1Q8TD33 95 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TMEM203Q969S6 136 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PTERQ96BW5 349 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 CXorf40BQ96DE9 158 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SLC35A5Q9BS91 424 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 GPR62Q9BZJ7 368 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 APOBEC3GQ9HC16 384 aaKnown RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 CACNG4Q9UBN1 327 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 EVPLQ92817 2033 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 MYH15Q9Y2K3 1946 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 OR2AG2A6NM03 316 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 NARSO43776 548 aaKnown RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 HTR1AP08908 422 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 GDF10P55107 478 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ACTA2P62736 377 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ACTG2P63267 376 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 GSG1LQ6UXU4 331 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TMED4Q7Z7H5 227 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ZNF283Q8N7M2 679 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 FKBP10Q96AY3 582 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TAPBPLQ9BX59 468 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 BCO2Q9BYV7 579 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 NELFAQ9H3P2 528 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 KIAA1522Q9P206 1035 aaPredicted RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 A3GALT2U3KPV4 340 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TEX13DA0A0J9YY54 714 aaPredicted RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 M0QZQ0 153 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TLX2O43763 284 aaPredicted RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 ACADMP11310 421 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PTPN2P17706 415 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 M6PRP20645 277 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 KELP23276 732 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SLC6A6P31641 620 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 NUDT1P36639 197 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PITPNBP48739 271 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 FLI1Q01543 452 aaPredicted RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 KCNC3Q14003 757 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TRAM2Q15035 370 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ARL6IP1Q15041 203 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PEA15Q15121 130 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PTCHD3Q3KNS1 767 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PLA2G4EQ3MJ16 856 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 CYBRD1Q53TN4 286 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 OTOP3Q7RTS5 596 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SLC16A9Q7RTY1 509 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RNF130Q86XS8 419 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 HS3ST5Q8IZT8 346 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 OR2AJ1Q8NGZ0 328 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RHOXF1Q8NHV9 184 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PEX13Q92968 403 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 C16orf58Q96GQ5 468 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SLC41A3Q96GZ6 507 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 LHPPQ9H008 270 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 CDC14AQ9UNH5 594 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 CA5BQ9Y2D0 317 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RPH3AQ9Y2J0 694 aaPredicted RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 CLDN24A6NM45 220 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 CPSF4LA6NMK7 179 aaKnown RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 M0R129 80 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 FFAR2O15552 330 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PCDH7O60245 1069 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 OR4Q2P0C623 313 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 DDX6P26196 483 aaKnown RBP eCLIP9.38□□□□□ -0.91
UFD1-205ENST00000459854 PLA2G16P53816 162 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TAS2R31P59538 309 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 NFKB2Q00653 900 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 MC2RQ01718 297 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ALG10Q5BKT4 473 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RAET1GQ6H3X3 334 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 MSANTD2Q6P1R3 559 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 ZNF709Q8N972 641 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RASGEF1AQ8N9B8 481 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 C5orf34Q96MH7 638 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 B3GNT4Q9C0J1 378 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 SLC32A1Q9H598 525 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 TPT1P8Q9HAU6 139 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 MEPEQ9NQ76 525 aaPredicted RBP9.38□□□□□ -0.91
UFD1-205ENST00000459854 B3GNT2Q9NY97 397 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 DTLQ9NZJ0 730 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 KLHL9Q9P2J3 617 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 RAI2Q9Y5P3 530 aa9.38□□□□□ -0.91
UFD1-205ENST00000459854 PRSS51A0A1B0GVH4 220 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MEIOCA2RUB1 952 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms