RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MTTPP55157 894 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 RPS4XP62701 263 aaKnown RBP11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 PRAMEP78395 509 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 GAB1Q13480 694 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 PWP1Q13610 501 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 CCNG2Q16589 344 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 CYP1B1Q16678 543 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 LRRC6Q86X45 466 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 TMEM132CQ8N3T6 1108 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 PPM1NQ8N819 430 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF611Q8N823 705 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 CEP112Q8N8E3 955 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 OR5L2Q8NGL0 311 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 ZPLD1Q8TCW7 415 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 GRK7Q8WTQ7 553 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 INTS12Q96CB8 462 aaKnown RBP11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 ZC3HAV1LQ96H79 300 aaKnown RBP11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 WDYHV1Q96HA8 205 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 QRFPRQ96P65 431 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 FAM111AQ96PZ2 611 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 P2RY12Q9H244 342 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 PACSIN3Q9UKS6 424 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 LAMP3Q9UQV4 416 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 SLC6A5Q9Y345 797 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 CLCA3PQ9Y6N3 262 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 SERINC4A6NH21 518 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 MSTNO14793 375 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 NDUFS4O43181 175 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 NDUFS3O75489 264 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 SLU7O95391 586 aaKnown RBP11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 ACSL3O95573 720 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 GAS8O95995 478 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 C1QAP02745 245 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 SERPIND1P05546 499 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF888P0CJ79 500 aaPredicted RBP11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 CYP4B1P13584 511 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 RPS3P23396 243 aaKnown RBP eCLIP11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 STIP1P31948 543 aaKnown RBP11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 GBX1Q14549 363 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 PARP6Q2NL67 630 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 KLHL38Q2WGJ6 581 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 TSTD2Q5T7W7 516 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 PRAMEF20Q5VT98 475 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 ADGRD1Q6QNK2 874 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 C4orf22Q6V702 233 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 SH2D5Q6ZV89 423 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 MILR1Q7Z6M3 343 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 CREG2Q8IUH2 290 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 OR8K3Q8NH51 312 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 SLC35B2Q8TB61 432 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 PAQR8Q8TEZ7 354 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 UCN3Q969E3 161 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 HEMGNQ9BXL5 484 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 PCBD2Q9H0N5 130 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 SLCO5A1Q9H2Y9 848 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 ACBD3Q9H3P7 528 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 ADAP2Q9NPF8 381 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 CATSPERZQ9NTU4 200 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 RIMKLBQ9ULI2 386 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF148Q9UQR1 794 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 FREM1Q5H8C1 2179 aa11.49□□□□□ -0.57
AC004540.1-204ENST00000449537 UQCRHLA0A096LP55 91 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 HS3ST1O14792 307 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 PSMD3O43242 534 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 LIASO43766 372 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ADAM11O75078 769 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 RBP3P10745 1247 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 CD79BP40259 229 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 SLCO1A2P46721 670 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 EIF3EP60228 445 aaKnown RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 RNF4P78317 190 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ACVR1Q04771 509 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 RGS1Q08116 209 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF791Q3KP31 576 aaPredicted RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 BBS9Q3SYG4 887 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ACSBG2Q5FVE4 666 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 PIGGQ5H8A4 983 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 NHSL2Q5HYW2 709 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF704Q6ZNC4 412 aaPredicted RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF550Q7Z398 422 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 LINC00523Q86TU6 105 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 C17orf64Q86WR6 236 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 MEX3DQ86XN8 651 aaKnown RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 GABPB2Q8TAK5 448 aaPredicted RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 DAZLQ92904 295 aaKnown RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ABTB1Q969K4 478 aaPredicted RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ANKRD9Q96BM1 317 aaPredicted RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 FAM136AQ96C01 138 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ZMYND19Q96E35 227 aaPredicted RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF778Q96MU6 729 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 UGT2B28Q9BY64 529 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 ESRP2Q9H6T0 727 aaKnown RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 L2HGDHQ9H9P8 463 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 CCDC177Q9NQR7 707 aaPredicted RBP11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 PRTFDC1Q9NRG1 225 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 CNIH4Q9P003 139 aa11.48□□□□□ -0.57
AC004540.1-204ENST00000449537 MARCH4Q9P2E8 410 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms