RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 OR4C11Q6IEV9 310 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 ISLR2Q6UXK2 745 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 SH2D5Q6ZV89 423 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 GPRIN3Q6ZVF9 776 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 TRABD2AQ86V40 505 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 SCUBE1Q8IWY4 988 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 ZNF595Q8IYB9 648 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 CDYL2Q8N8U2 506 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 TMEM52Q8NDY8 209 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 RDH11Q8TC12 318 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 SELENOMQ8WWX9 145 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 CNDP1Q96KN2 507 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 SMC6Q96SB8 1091 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 ZNF382Q96SR6 550 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 MAPKAP1Q9BPZ7 522 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 WDR77Q9BQA1 342 aaPredicted RBP13.65□□□□□ -0.22
USP39-206ENST00000448971 ILKAPQ9H0C8 392 aaPredicted RBP13.65□□□□□ -0.22
USP39-206ENST00000448971 C12orf65Q9H3J6 166 aaKnown RBP13.65□□□□□ -0.22
USP39-206ENST00000448971 NECTIN3Q9NQS3 549 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 MKS1Q9NXB0 559 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 OTOGQ6ZRI0 2925 aa13.65□□□□□ -0.22
USP39-206ENST00000448971 IGKV3D-11A0A0A0MRZ8 115 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 TCRBV16S1A1N1A0A5B0 115 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 ANKUB1A6NFN9 424 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 A8MUA0 341 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 G3V2L1 256 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 FOXE1O00358 373 aaPredicted RBP13.64□□□□□ -0.23
USP39-206ENST00000448971 SEMA3DO95025 777 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 ETHE1O95571 254 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 PRSS12P56730 875 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 SLC18A2Q05940 514 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 STX4Q12846 297 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 MFAP5Q13361 173 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 CUL3Q13618 768 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 CFAP157Q5JU67 520 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
USP39-206ENST00000448971 IMMP1LQ96LU5 166 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 C5orf34Q96MH7 638 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 HBEGFQ99075 208 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 KCNK13Q9HB14 408 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 ZBTB20Q9HC78 741 aaPredicted RBP13.64□□□□□ -0.23
USP39-206ENST00000448971 LYARQ9NX58 379 aaKnown RBP13.64□□□□□ -0.23
USP39-206ENST00000448971 PHF11Q9UIL8 331 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 SLC12A4Q9UP95 1085 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 NTNG1Q9Y2I2 539 aa13.64□□□□□ -0.23
USP39-206ENST00000448971 ARHGAP10A1A4S6 786 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 DYTNA2CJ06 578 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 SYNDIG1LA6NDD5 238 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 SPAG7O75391 227 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 ERLIN1O75477 346 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 CRCPO75575 148 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 MYO1DO94832 1006 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 PDYNP01213 254 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 KRT6AP02538 564 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 KRT6BP04259 564 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 IFNA16P05015 189 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 CPA3P15088 417 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 BUD31P41223 144 aaPredicted RBP13.63□□□□□ -0.23
USP39-206ENST00000448971 KRT6CP48668 564 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 ARFIP1P53367 373 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 SLC26A5P58743 744 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 TAS2R50P59544 299 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 ARG2P78540 354 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 TNFRSF17Q02223 184 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 ZNF33BQ06732 778 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 ZNF844Q08AG5 666 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 SLAMF1Q13291 335 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 TCHHL1Q5QJ38 904 aaPredicted RBP13.63□□□□□ -0.23
USP39-206ENST00000448971 ABHD17BQ5VST6 288 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 FAM219BQ5XKK7 198 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 B3GNTL1Q67FW5 361 aaPredicted RBP13.63□□□□□ -0.23
USP39-206ENST00000448971 Q6ZS92 163 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 AMER2Q8N7J2 671 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 FAM111AQ96PZ2 611 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 MRPL1Q9BYD6 325 aaKnown RBP13.63□□□□□ -0.23
USP39-206ENST00000448971 GSTO2Q9H4Y5 243 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 MID1IP1Q9NPA3 183 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 PNO1Q9NRX1 252 aaKnown RBP13.63□□□□□ -0.23
USP39-206ENST00000448971 FARSBQ9NSD9 589 aaKnown RBP13.63□□□□□ -0.23
USP39-206ENST00000448971 MS4A12Q9NXJ0 267 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 TEKT2Q9UIF3 430 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 PPT2Q9UMR5 302 aa13.63□□□□□ -0.23
USP39-206ENST00000448971 COPG1Q9Y678 874 aaKnown RBP13.63□□□□□ -0.23
USP39-206ENST00000448971 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 CCDC151A5D8V7 595 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 A8MUI8 341 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 CYR61O00622 381 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 RGS16O15492 202 aaPredicted RBP13.62□□□□□ -0.23
USP39-206ENST00000448971 LDB3O75112 727 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 EEDO75530 441 aaKnown RBP13.62□□□□□ -0.23
USP39-206ENST00000448971 GBAP04062 536 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 ENO1P06733 434 aaKnown RBP13.62□□□□□ -0.23
USP39-206ENST00000448971 NR2F6P10588 404 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 TLX1P31314 330 aaPredicted RBP13.62□□□□□ -0.23
USP39-206ENST00000448971 BSGP35613 385 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 SOX11P35716 441 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 NAGLUP54802 743 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms