RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NR2F6P10588 404 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 CHN1P15882 459 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 HNRNPH2P55795 449 aaKnown RBP13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 BTKQ06187 659 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 TBL3Q12788 808 aaKnown RBP13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 SERTAD2Q14140 314 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 SH2D4BQ5SQS7 431 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 AGAP7PQ5VUJ5 663 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 FAM219BQ5XKK7 198 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 C18orf63Q68DL7 685 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 PLAG1Q6DJT9 500 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 MRM1Q6IN84 353 aaKnown RBP13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 ASB18Q6ZVZ8 466 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 CLYBLQ8N0X4 340 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 TMEM52Q8NDY8 209 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 MGARPQ8TDB4 240 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 TANKQ92844 425 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 AGAP4Q96P64 663 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 SEMA4CQ9C0C4 833 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 ACBD3Q9H3P7 528 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 TRAF6Q9Y4K3 522 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 ASB4Q9Y574 426 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 A8MUA0 341 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 TMEM114B3SHH9 223 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 RGS14O43566 566 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 LDB3O75112 727 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 MYO1DO94832 1006 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 FGF4P08620 206 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 PRR35P0CG20 571 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 DHRS4L1P0CG22 281 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 PLA2G2AP14555 144 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 TNNI3P19429 210 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 GRK2P25098 689 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 SLC18A1P54219 525 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 Q0VFX4 171 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 MPP2Q14168 576 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 KANK2Q63ZY3 851 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 JMJD6Q6NYC1 403 aaPredicted RBP13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 TRIM46Q7Z4K8 759 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 DDIASQ8IXT1 998 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 M1APQ8TC57 530 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 AGR3Q8TD06 166 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 CHTF18Q8WVB6 975 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 IMMP1LQ96LU5 166 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 SMAD5Q99717 465 aaKnown RBP13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 FAIM2Q9BWQ8 316 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 ALOXE3Q9BYJ1 711 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 TNFRSF12AQ9NP84 129 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 C5AR2Q9P296 337 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 MCM8Q9UJA3 840 aa13.14□□□□□ -0.31
GTF3C3-206ENST00000448539 PCSK5Q92824 1860 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 GNG14A0A1W2PPG7 69 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 A0A1W2PR48 441 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 SAGE2PA6NJ88 616 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 DYRK3O43781 588 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 PCDH7O60245 1069 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 RSL1D1O76021 490 aaKnown RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 SNUPNO95149 360 aaKnown RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 ZIC2O95409 532 aaPredicted RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 AIFM1O95831 613 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 COX7A2P14406 83 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 NR1D1P20393 614 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 BGNP21810 368 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 SLC26A5P58743 744 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 TAS2R50P59544 299 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 ABCE1P61221 599 aaKnown RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 TRA2BP62995 288 aaKnown RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 ID2Q02363 134 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 STX3Q13277 289 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 BIKQ13323 160 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 NDUFAF5Q5TEU4 345 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 OR52E8Q6IFG1 317 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 ZNF605Q86T29 641 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 HPS6Q86YV9 775 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 TMEM132CQ8N3T6 1108 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 BRIX1Q8TDN6 353 aaKnown RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 DAZLQ92904 295 aaKnown RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 APIPQ96GX9 242 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 ATP6V1G3Q96LB4 118 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 EPS8L2Q9H6S3 715 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 ZNF552Q9H707 407 aaPredicted RBP13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 KCNK13Q9HB14 408 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 ADAP2Q9NPF8 381 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 PFDN4Q9NQP4 134 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 PTGFRNQ9P2B2 879 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 TEKT2Q9UIF3 430 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 CLCA3PQ9Y6N3 262 aa13.13□□□□□ -0.31
GTF3C3-206ENST00000448539 NUP210LQ5VU65 1888 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 MYOCOSA0A1B0GUC4 107 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 GLOD5A6NK44 160 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 A8MUI8 341 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 HMGB1P1B2RPK0 211 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms