RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 SCYL1Q96KG9 808 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 DMRT3Q9NQL9 472 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 COPS7AQ9UBW8 275 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 PHF11Q9UIL8 331 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 TMCO1Q9UM00 188 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 TSC22D4Q9Y3Q8 395 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 CRYBG3Q68DQ2 2970 aa18.33■□□□□ 0.52
VCP-203ENST00000448530 LRRC14BA6NHZ5 514 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 A8MVJ9 347 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 PRSS44E7EML9 344 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 TFECO14948 347 aaPredicted RBP18.32■□□□□ 0.52
VCP-203ENST00000448530 PEX1O43933 1283 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 KLK8O60259 260 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 OR2J2O76002 312 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 WISP2O76076 250 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 TUBB4AP04350 444 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 ID2Q02363 134 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 C3AR1Q16581 482 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 CPSF6Q16630 551 aaKnown RBP eCLIP18.32■□□□□ 0.52
VCP-203ENST00000448530 TECRLQ5HYJ1 363 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 UBAP2Q5T6F2 1119 aaKnown RBP18.32■□□□□ 0.52
VCP-203ENST00000448530 GOLGA7Q7Z5G4 137 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 MRGPRGQ86SM5 289 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 GPR180Q86V85 440 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 SIAH3Q8IW03 269 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 SULF2Q8IWU5 870 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 GPALPP1Q8IXQ4 340 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 RNF175Q8N4F7 328 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 GPR78Q96P69 363 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 DGAT2Q96PD7 388 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 PAFAH2Q99487 392 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 SORBS1Q9BX66 1292 aaKnown RBP18.32■□□□□ 0.52
VCP-203ENST00000448530 FUT8Q9BYC5 575 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 RPF2Q9H7B2 306 aaKnown RBP18.32■□□□□ 0.52
VCP-203ENST00000448530 HPF1Q9NWY4 346 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 MYOTQ9UBF9 498 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 TINAGQ9UJW2 476 aa18.32■□□□□ 0.52
VCP-203ENST00000448530 POC1B-GALNT4F8VUJ3 575 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 H0YIV9 168 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 KIF2AO00139 706 aaPredicted RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 SMIM24O75264 130 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 SIX3O95343 332 aaPredicted RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 CNTFP26441 200 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 BUD31P41223 144 aaPredicted RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 ARFIP1P53367 373 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 RPS13P62277 151 aaKnown RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 BIKQ13323 160 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 ART3Q13508 389 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 TSNAXIP1Q2TAA8 658 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 ZNF808Q8N4W9 903 aaPredicted RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 PTGR2Q8N8N7 351 aaPredicted RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 OR5L2Q8NGL0 311 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 SLC2A12Q8TD20 617 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 ITLN2Q8WWU7 325 aaPredicted RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 SREK1Q8WXA9 508 aaKnown RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 TANKQ92844 425 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 LIN28AQ9H9Z2 209 aaKnown RBP18.31■□□□□ 0.52
VCP-203ENST00000448530 ZNF835Q9Y2P0 537 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 GTF3C1Q12789 2109 aa18.31■□□□□ 0.52
VCP-203ENST00000448530 CELSR2Q9HCU4 2923 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 A0A087WUV0 522 aaPredicted RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 WWP2O00308 870 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 PLPP1O14494 284 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 PRKNO60260 465 aaPredicted RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 CLDN9O95484 217 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 COL6A2P12110 1019 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 SMSP52788 366 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 RNFT1Q5M7Z0 435 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 CYP20A1Q6UW02 462 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 IL20RBQ6UXL0 311 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 C16orf47Q6ZP98 133 aaPredicted RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 Q6ZPB1 254 aaPredicted RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 MDGA2Q7Z553 956 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 PLD6Q8N2A8 252 aaKnown RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 ZCCHC7Q8N3Z6 543 aaKnown RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 OR8K3Q8NH51 312 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 UHMK1Q8TAS1 419 aaKnown RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 ANKRD9Q96BM1 317 aaPredicted RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 PHF21BQ96EK2 531 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 RBM18Q96H35 190 aaKnown RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 NOL11Q9H8H0 719 aaKnown RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 LYARQ9NX58 379 aaKnown RBP18.3■□□□□ 0.52
VCP-203ENST00000448530 ENTPD4Q9Y227 616 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 RNF11Q9Y3C5 154 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 ITPR2Q14571 2701 aa18.3■□□□□ 0.52
VCP-203ENST00000448530 PRRG2O14669 202 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 HNRNPRO43390 633 aaKnown RBP18.29■□□□□ 0.52
VCP-203ENST00000448530 FGF17O60258 216 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 RFC3P40938 356 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 STT3AP46977 705 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 CCNG1P51959 295 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 HK2P52789 917 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 GPR85P60893 370 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 RNF4P78317 190 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 PLIN5Q00G26 463 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 TNFRSF17Q02223 184 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 CUL3Q13618 768 aa18.29■□□□□ 0.52
VCP-203ENST00000448530 SP5Q6BEB4 398 aaPredicted RBP18.29■□□□□ 0.52
VCP-203ENST00000448530 TTC19Q6DKK2 380 aaPredicted RBP18.29■□□□□ 0.52
VCP-203ENST00000448530 XKRXQ6PP77 449 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms