RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 AIM2O14862 343 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ATP5HO75947 161 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 KIAA0754O94854 1291 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 SDHBP21912 280 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 PHC1P78364 1004 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 MAPKAPK3Q16644 382 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ZNF385BQ569K4 471 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 SLC48A1Q6P1K1 146 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 SHISA5Q8N114 240 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ADAMTS14Q8WXS8 1223 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 RCN3Q96D15 328 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ZNF764Q96H86 408 aaPredicted RBP18.42■□□□□ 0.54
SGCE-207ENST00000447873 NPAS2Q99743 824 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ULBP3Q9BZM4 244 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 BHLHE41Q9C0J9 482 aaPredicted RBP18.42■□□□□ 0.54
SGCE-207ENST00000447873 FAM120CQ9NX05 1096 aaKnown RBP18.42■□□□□ 0.54
SGCE-207ENST00000447873 TAS2R7Q9NYW3 318 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 TRPC4Q9UBN4 977 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 SATB2Q9UPW6 733 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 MRPS33Q9Y291 106 aaKnown RBP18.42■□□□□ 0.54
SGCE-207ENST00000447873 MAP4K5Q9Y4K4 846 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 B3GALT1Q9Y5Z6 326 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 PMS2P1A4D2B8 440 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 FAM149AA5PLN7 773 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 WASHC1A8K0Z3 465 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 FAM227AF5H4B4 570 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 FBP2O00757 339 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 MRASO14807 208 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 UNC5CO95185 931 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 ZNF28P17035 718 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 ITGAXP20702 1163 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 XCR1P46094 333 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 MXRA7P84157 204 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 TLR1Q15399 786 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 COQ5Q5HYK3 327 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 TMEM164Q5U3C3 297 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 ANXA8L1Q5VT79 327 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 REP15Q6BDI9 236 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 FAM180BQ6P0A1 224 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 SLC2A7Q6PXP3 512 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 GALNT15Q8N3T1 639 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 NATD1Q8N6N6 113 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 PCYOX1LQ8NBM8 494 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 TBC1D20Q96BZ9 403 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 KLHL29Q96CT2 875 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 RTKNQ9BST9 563 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 DDA1Q9BW61 102 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 RBCK1Q9BYM8 510 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 RMND5AQ9H871 391 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 PRDM9Q9NQV7 894 aa18.41■□□□□ 0.54
SGCE-207ENST00000447873 PTPRBP23467 1997 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 ASPDHA6ND91 283 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 B2RBV5 119 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 ERAL1O75616 437 aaKnown RBP18.4■□□□□ 0.54
SGCE-207ENST00000447873 NUDT2P50583 147 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 WNT3P56703 355 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 DCDP81605 110 aaKnown RBP18.4■□□□□ 0.54
SGCE-207ENST00000447873 ART3Q13508 389 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 PRSS53Q2L4Q9 553 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 NKAIN1Q4KMZ8 207 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 MSANTD1Q6ZTZ1 278 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 YTHDF3Q7Z739 585 aaKnown RBP18.4■□□□□ 0.54
SGCE-207ENST00000447873 RETREG3Q86VR2 466 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 ANKRD46Q86W74 232 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 DNAJB14Q8TBM8 379 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 TANKQ92844 425 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 CIDECQ96AQ7 238 aaPredicted RBP18.4■□□□□ 0.54
SGCE-207ENST00000447873 SLC35C2Q9NQQ7 365 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 GIMAP4Q9NUV9 329 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 CES1P1Q9UKY3 287 aa18.4■□□□□ 0.54
SGCE-207ENST00000447873 PRSS51A0A1B0GVH4 220 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 A0A1W2PNU3 283 aaPredicted RBP18.39■□□□□ 0.53
SGCE-207ENST00000447873 BLACEA4D250 179 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 MEN1O00255 615 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 PDPK1O15530 556 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 HNRNPCL1O60812 293 aaKnown RBP18.39■□□□□ 0.53
SGCE-207ENST00000447873 KLK3P07288 261 aaPredicted RBP18.39■□□□□ 0.53
SGCE-207ENST00000447873 AGXTP21549 392 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 IL10P22301 178 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 RORAP35398 523 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 RASSF2P50749 326 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 HNRNPFP52597 415 aaKnown RBP18.39■□□□□ 0.53
SGCE-207ENST00000447873 PLIN5Q00G26 463 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 PAGE3Q5JUK9 113 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 C6orf10Q5SRN2 563 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 ZNF771Q7L3S4 317 aaPredicted RBP18.39■□□□□ 0.53
SGCE-207ENST00000447873 TMEM52Q8NDY8 209 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 LRFN5Q96NI6 719 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 OR1F2PQ96R84 312 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 DLL3Q9NYJ7 618 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 ENTPD4Q9Y227 616 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 PCDHGA3Q9Y5H0 932 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 ZNF780BQ9Y6R6 833 aa18.39■□□□□ 0.53
SGCE-207ENST00000447873 RNASET2O00584 256 aaKnown RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 CLDN4O14493 209 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 B4GALT2O60909 372 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 CDC123O75794 336 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 FHP07954 510 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 EFNA1P20827 205 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 LRRC74AQ0VAA2 488 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms