RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TUBA8Q9NY65 449 aaPredicted RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 EHD3Q9NZN3 535 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 NDUFAF4Q9P032 175 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 PDP1Q9P0J1 537 aaPredicted RBP16.55■□□□□ 0.24
SMC6-206ENST00000446852 SLCO1B1Q9Y6L6 691 aa16.55■□□□□ 0.24
SMC6-206ENST00000446852 CHRNB1P11230 501 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 DDX5P17844 614 aaKnown RBP16.54■□□□□ 0.24
SMC6-206ENST00000446852 GSTT1P30711 240 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 DGKEP52429 567 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ILF3Q12906 894 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMC6-206ENST00000446852 CYP27C1Q4G0S4 372 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ZNF542PQ5EBM4 170 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 C6orf120Q7Z4R8 191 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 THAP5Q7Z6K1 395 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 PSMA8Q8TAA3 256 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 AMDHD1Q96NU7 426 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 OR2A14Q96R47 310 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ING2Q9H160 280 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 SERHL2Q9H4I8 314 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 SLC35C2Q9NQQ7 365 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 LOC100130705A0A1B0GUX0 176 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 PGRMC2O15173 223 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ZW10O43264 779 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 DPM1O60762 260 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 CELA2BP08218 269 aaPredicted RBP16.54■□□□□ 0.24
SMC6-206ENST00000446852 MAGP20916 626 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 PTGER1P34995 402 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 CCR5P51681 352 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ARHGDIAP52565 204 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 RAD23AP54725 363 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ELOAQ14241 798 aaKnown RBP16.54■□□□□ 0.24
SMC6-206ENST00000446852 SPDYE7PQ495Y7 208 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ZC3H12BQ5HYM0 836 aaKnown RBP16.54■□□□□ 0.24
SMC6-206ENST00000446852 KCT2Q8NC54 265 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 NCSTNQ92542 709 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 GPR174Q9BXC1 333 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 FBXW2Q9UKT8 454 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 ANGPT4Q9Y264 503 aa16.54■□□□□ 0.24
SMC6-206ENST00000446852 AIFM1O95831 613 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 UGT2B7P16662 529 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 IL7RP16871 459 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 RRM2P31350 389 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 KIR2DS3Q14952 304 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 MLC1Q15049 377 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 CCDC85BQ15834 202 aaPredicted RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 RFX4Q33E94 735 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 IFI44LQ53G44 452 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 RPS26P11Q5JNZ5 115 aaPredicted RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 SMYD1Q8NB12 490 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 PIK3C3Q8NEB9 887 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 GPBAR1Q8TDU6 330 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 SLC38A5Q8WUX1 472 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 RAB8BQ92930 207 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 SLC22A18Q96BI1 424 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 NRBF2Q96F24 287 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 FAIM2Q9BWQ8 316 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 ORC6Q9Y5N6 252 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 OR2A25A4D2G3 310 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 H3BSA7 217 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 SLC16A6O15403 523 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 POLR2CP19387 275 aaPredicted RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 CCT3P49368 545 aaKnown RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 ARFIP1P53367 373 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 EIF2B5Q13144 721 aaKnown RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 TP53BP2Q13625 1128 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 MAPK11Q15759 364 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 CTU2Q2VPK5 515 aaKnown RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 C18orf63Q68DL7 685 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 REEP3Q6NUK4 255 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 BORAQ6PGQ7 559 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 ZNF687Q8N1G0 1237 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 OR10G6Q8NH81 332 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 ADAMTS16Q8TE57 1224 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 NMD3Q96D46 503 aaKnown RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 EPYCQ99645 322 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 YTHDF1Q9BYJ9 559 aaKnown RBP16.53■□□□□ 0.24
SMC6-206ENST00000446852 RUBCNLQ9H714 662 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 A4GALTQ9NPC4 353 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 RAB23Q9ULC3 237 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 DMTF1Q9Y222 760 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 CEPT1Q9Y6K0 416 aa16.53■□□□□ 0.24
SMC6-206ENST00000446852 A0A1W2PS29 197 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 HMGN4O00479 90 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 PRAMEF10O60809 474 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 CTSVO60911 334 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 TNFP01375 233 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 C9P02748 559 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 BCHEP06276 602 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 ITGAMP11215 1152 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 RPS15AP62244 130 aaKnown RBP16.52■□□□□ 0.24
SMC6-206ENST00000446852 DUSP2Q05923 314 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 CD47Q08722 323 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 TDGQ13569 410 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 GAS6Q14393 721 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 ZNF750Q32MQ0 723 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 ZNF691Q5VV52 312 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 FBXO42Q6P3S6 717 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 SYT13Q7L8C5 426 aa16.52■□□□□ 0.24
SMC6-206ENST00000446852 TRIM48Q8IWZ4 208 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms