RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PKP1Q13835 747 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 TAF1AQ15573 450 aaPredicted RBP9.94□□□□□ -0.82
RTN4-211ENST00000438462 DBN1Q16643 649 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 GPR33Q49SQ1 333 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 BOLA3Q53S33 107 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 KLHDC7AQ5VTJ3 777 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 ICE2Q659A1 982 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 ISM2Q6H9L7 571 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 TTC23LQ6PF05 361 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 TAS2R42Q7RTR8 314 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 YRDCQ86U90 279 aaKnown RBP9.94□□□□□ -0.82
RTN4-211ENST00000438462 CCDC116Q8IYX3 515 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 FAM13CQ8NE31 585 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 OR10G3Q8NGC4 313 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 MRGPRX2Q96LB1 330 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 MOCS1Q9NZB8 636 aa9.94□□□□□ -0.82
RTN4-211ENST00000438462 CNOT11Q9UKZ1 510 aaKnown RBP9.94□□□□□ -0.82
RTN4-211ENST00000438462 CHCHD2Q9Y6H1 151 aaPredicted RBP9.94□□□□□ -0.82
RTN4-211ENST00000438462 A0A0A6YYK5 440 aaPredicted RBP9.93□□□□□ -0.82
RTN4-211ENST00000438462 SHISA9B4DS77 424 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 EIF3FO00303 357 aaPredicted RBP9.93□□□□□ -0.82
RTN4-211ENST00000438462 B3GALT4O96024 378 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 UCHL3P15374 230 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 TTKP33981 857 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 PNLIPRP1P54315 467 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 IRF9Q00978 393 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 RELAQ04206 551 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 BRICD5Q6PL45 260 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 GLCCI1Q86VQ1 547 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 RELL1Q8IUW5 271 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 MCOLN2Q8IZK6 566 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 ZNF321PQ8N8H1 164 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 FAM83FQ8NEG4 500 aaPredicted RBP9.93□□□□□ -0.82
RTN4-211ENST00000438462 CTHRC1Q96CG8 243 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 SPACA9Q96E40 222 aaPredicted RBP9.93□□□□□ -0.82
RTN4-211ENST00000438462 GNRHR2Q96P88 292 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 DUX5Q96PT3 197 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 STK33Q9BYT3 514 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 CNIH4Q9P003 139 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 SPATA7Q9P0W8 599 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 FAM153AQ9UHL3 310 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 MAN1B1Q9UKM7 699 aa9.93□□□□□ -0.82
RTN4-211ENST00000438462 FAM237AA0A1B0GTK4 181 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 TMEM191CA6NGB0 347 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 AVILO75366 819 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 C1orf105O95561 183 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 PAMP19021 973 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 CCR7P32248 378 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 GCKP35557 465 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 RPL21P46778 160 aaKnown RBP9.92□□□□□ -0.82
RTN4-211ENST00000438462 CHN2P52757 468 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 RNF4P78317 190 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 ASPHQ12797 758 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 CUL4AQ13619 759 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 BMPR2Q13873 1038 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 DOC2AQ14183 400 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 MEI1Q5TIA1 1274 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 C17orf107Q6ZR85 190 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 ZNF619Q8N2I2 560 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 BPIFB2Q8N4F0 458 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 IPMKQ8NFU5 416 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 HPS1Q92902 700 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 ZNF830Q96NB3 372 aaPredicted RBP9.92□□□□□ -0.82
RTN4-211ENST00000438462 GOLPH3LQ9H4A5 285 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 PARVAQ9NVD7 372 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 IKBKGQ9Y6K9 419 aa9.92□□□□□ -0.82
RTN4-211ENST00000438462 LCE6AA0A183 80 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 LOC390937A0A1W2PQ73 354 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 DPRXA6NFQ7 191 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 SLC22A20A6NK97 555 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 SLC22A31A6NKX4 558 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 GALR3O60755 368 aaPredicted RBP9.91□□□□□ -0.82
RTN4-211ENST00000438462 CCNDBP1O95273 360 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 BCL10O95999 233 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 EPOP01588 193 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 MASP1P48740 699 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 ZNF140P52738 457 aaPredicted RBP9.91□□□□□ -0.82
RTN4-211ENST00000438462 PRDX1Q06830 199 aaKnown RBP9.91□□□□□ -0.82
RTN4-211ENST00000438462 DPYSL3Q14195 570 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 ZSWIM7Q19AV6 140 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 DEFB134Q4QY38 66 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 SAMD5Q5TGI4 173 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 FNDC7Q5VTL7 733 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 LEG1Q6P5S2 330 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 MUC15Q8N387 334 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 CAMKVQ8NCB2 501 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 FAM110DQ8TAY7 271 aaPredicted RBP9.91□□□□□ -0.82
RTN4-211ENST00000438462 S100PBPQ96BU1 408 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 SNX18Q96RF0 628 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 CITED1Q99966 193 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 RSPO3Q9BXY4 272 aaPredicted RBP9.91□□□□□ -0.82
RTN4-211ENST00000438462 NGBQ9NPG2 151 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 ABCF3Q9NUQ8 709 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 DLGAP4Q9Y2H0 992 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 PCDHGB5Q9Y5G0 923 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 FKBP7Q9Y680 259 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 SLC22A7Q9Y694 548 aa9.91□□□□□ -0.82
RTN4-211ENST00000438462 LOC105371242A0A075B767 164 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 E7ENX8 843 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms