RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 Q6ZPB1 254 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-205ENST00000438362 RTL4Q6ZR62 310 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 RNF175Q8N4F7 328 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 CHST14Q8NCH0 376 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 SP7Q8TDD2 431 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-205ENST00000438362 GGHQ92820 318 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 ARMC5Q96C12 935 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM19Q96HH6 336 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 PRAP1Q96NZ9 151 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 TTLL2Q9BWV7 592 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 RAB11FIP5Q9BXF6 653 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 IRF2BPLQ9H1B7 796 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 ADAP2Q9NPF8 381 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 PAQR5Q9NXK6 330 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-205ENST00000438362 HSPB11Q9Y547 144 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 COLEC10Q9Y6Z7 277 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 MYO10Q9HD67 2058 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3DA0A087WVF3 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3IA0A087WXS9 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3EA0A087X179 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3KA0A087X1G2 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3FA6NER0 549 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NOTOA8MTQ0 251 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3LB9A6J9 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PRAMEF12O95522 483 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PEX11BO96011 259 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PRLP01236 227 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 DNTTP04053 509 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NUDT7P0C024 238 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3HP0C7X1 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 IDUAP35475 653 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CAPZA2P47755 286 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SLC9A3P48764 834 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PPP3R1P63098 170 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TLE2Q04725 743 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PTGES3Q15185 160 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 KCNJ8Q15842 424 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3GQ6DHY5 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3CQ6IPX1 549 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 BHLHA9Q7RTU4 235 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 RIMKLAQ8IXN7 391 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TBC1D3Q8IZP1 549 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 DNAJC22Q8N4W6 341 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SLC37A3Q8NCC5 494 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 OR56A1Q8NGH5 318 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ADAMTS16Q8TE57 1224 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 LCN9Q8WX39 176 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF689Q96CS4 500 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF486Q96H40 463 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 LRIG1Q96JA1 1093 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 IL17FQ96PD4 163 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 BEX2Q9BXY8 128 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PRKAB1Q9Y478 270 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 LRRC37AA6NMS7 1700 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 INMT-MINDY4F8WBC2 141 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 RTCAO00442 366 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ADAM12O43184 909 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 KCNK5O95279 499 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NUDT14O95848 222 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 HIST1H2ABP04908 130 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NR4A2P43354 598 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NRIP1P48552 1158 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 FPGSQ05932 587 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 LRRC32Q14392 662 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CTU2Q2VPK5 515 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 FRMPD2BQ6IN97 320 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SLC8B1Q6J4K2 584 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PSRC1Q6PGN9 363 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 HIST3H2AQ7L7L0 130 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF551Q7Z340 670 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 MMAAQ8IVH4 418 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NEIL3Q8TAT5 605 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ZCCHC10Q8TBK6 192 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SETD7Q8WTS6 366 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NR4A3Q92570 626 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 OSTF1Q92882 214 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 HIST1H2ACQ93077 130 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 VMP1Q96GC9 406 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 F2RL3Q96RI0 385 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TTYH2Q9BSA4 534 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 P2RY12Q9H244 342 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ASIC5Q9NY37 505 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CNOT2Q9NZN8 540 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 HSFX1Q9UBD0 423 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 FBXO10Q9UK96 956 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM98Q9Y2Y6 226 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 IRAK3Q9Y616 596 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CLCA3PQ9Y6N3 262 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TRBV23OR9-2A0A075B6M9 112 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GLOD5A6NK44 160 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ANHXE9PGG2 379 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TMX2-CTNND1H3BSU7 103 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF821O75541 412 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ITGBL1O95965 494 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 HLA-DQA2P01906 255 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 STATHP02808 62 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 IFNA16P05015 189 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GPX2P18283 190 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 DDX6P26196 483 aaKnown RBP eCLIP6.39□□□□□ -1.394e-6■□□□□ 10
CSDE1-205ENST00000438362 CLK3P49761 638 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms