RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 ETHE1O95571 254 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 TSPAN19P0C672 248 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 GZMKP49863 264 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 HBA1P69905 142 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 CDK6Q00534 326 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 TLE2Q04725 743 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 EEF1A2Q05639 463 aaKnown RBP14.25□□□□□ -0.13
TOP3B-206ENST00000436282 HNRNPA0Q13151 305 aaKnown RBP14.25□□□□□ -0.13
TOP3B-206ENST00000436282 C1DQ13901 141 aaKnown RBP14.25□□□□□ -0.13
TOP3B-206ENST00000436282 DOC2AQ14183 400 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 RNLSQ5VYX0 342 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 HS6ST3Q8IZP7 471 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 CAMKK1Q8N5S9 505 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 YIPF7Q8N8F6 280 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 BHLHE41Q9C0J9 482 aaPredicted RBP14.25□□□□□ -0.13
TOP3B-206ENST00000436282 FAM83DQ9H4H8 585 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 NIPAL2Q9H841 368 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
TOP3B-206ENST00000436282 TOR4AQ9NXH8 423 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 STMN3Q9NZ72 180 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 NDOR1Q9UHB4 597 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 STOML2Q9UJZ1 356 aa14.25□□□□□ -0.13
TOP3B-206ENST00000436282 LSM7Q9UK45 103 aaKnown RBP14.25□□□□□ -0.13
TOP3B-206ENST00000436282 E7EQ34 232 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 H0YIV9 168 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 POLR1CO15160 346 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 SOCS5O75159 536 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 FHP07954 510 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 SRCP12931 536 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 GPC1P35052 558 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 CTSOP43234 321 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 TNK1Q13470 666 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ATP13A5Q4VNC0 1218 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ZNF385BQ569K4 471 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 HSDL2Q6YN16 418 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 OXR1Q8N573 874 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 CXorf40BQ96DE9 158 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ASIC4Q96FT7 647 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 IL21Q9HBE4 155 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 C1GALT1Q9NS00 363 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 TXNL4BQ9NX01 149 aaKnown RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PLEKHB1Q9UF11 243 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 RPL36Q9Y3U8 105 aaKnown RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 SNX11Q9Y5W9 270 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 IGLV3-16A0A075B6K0 115 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 A0A1W2PQ67 120 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PDE9AO76083 593 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ADAP00813 363 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 CXCL10P02778 98 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 CCNYL3P0C7X3 344 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 DGKEP52429 567 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 RAB33AQ14088 237 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 GPR19Q15760 415 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ZNF630Q2M218 657 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PYDC2Q56P42 97 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 DDI2Q5TDH0 399 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 LIPKQ5VXJ0 399 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 GRHL2Q6ISB3 625 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 RFLNAQ6ZTI6 216 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ELMOD2Q8IZ81 293 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 SLC39A11Q8N1S5 342 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 SNAPC3Q92966 411 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PRRG3Q9BZD7 231 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 RHCGQ9UBD6 479 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 GNG14A0A1W2PPG7 69 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 TRBC2A0A5B9 178 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 NPIPB15A6NHN6 443 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PLD2O14939 933 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 TEX28O15482 410 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 SH3BGRLO75368 114 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 MSL3P1P0C860 447 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 OSMP13725 252 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PKLRP30613 574 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 TIA1P31483 386 aaKnown RBP eCLIP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ZNF91Q05481 1191 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 FOXD4Q12950 439 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 KCNC3Q14003 757 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.24□□□□□ -0.137e-7■□□□□ 8.4
TOP3B-206ENST00000436282 SPIN4Q56A73 249 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PLEKHS1Q5SXH7 462 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 LCN1P1Q5VSP4 162 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 TRIM40Q6P9F5 258 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 PLET1Q6UQ28 207 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 Q6ZNB5 142 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 FAM92BQ6ZTR7 304 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 GAREM2Q75VX8 874 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 DDX53Q86TM3 631 aaKnown RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 THOC6Q86W42 341 aaKnown RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 FAM109AQ8N4B1 249 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 OR4K1Q8NGD4 311 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 MRPS31Q92665 395 aaKnown RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 CITED4Q96RK1 184 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 SGK2Q9HBY8 427 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 REV1Q9UBZ9 1251 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 ATP6V1HQ9UI12 483 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 KCND3Q9UK17 655 aa14.24□□□□□ -0.13
TOP3B-206ENST00000436282 EXO1Q9UQ84 846 aaKnown RBP14.24□□□□□ -0.13
TOP3B-206ENST00000436282 MYL12BO14950 172 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms