RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 CLCA3PQ9Y6N3 262 aa8.32□□□□□ -1.08
LSG1-202ENST00000427461 hCG_1818297A0A087WSY0 165 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 FRG2CA6NGY1 282 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 OR1F1O43749 312 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 KIAA0513O60268 411 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 OR10H2O60403 315 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 TRIM3O75382 744 aaPredicted RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 STK10O94804 968 aaKnown RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 METTL18O95568 372 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 TGM6O95932 706 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 IFNA16P05015 189 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 H2AFZP0C0S5 128 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 HRH2P25021 359 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 CTNNA2P26232 953 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 KCNJ5P48544 419 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 GAB1Q13480 694 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 RPS6KA1Q15418 735 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 ELAVL1Q15717 326 aaKnown RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 PRR31Q5SQ13 230 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 TSTD2Q5T7W7 516 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 LRRC38Q5VT99 294 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 FNDC7Q5VTL7 733 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 H2AFVQ71UI9 128 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 ADGRE4PQ86SQ3 457 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 YRDCQ86U90 279 aaKnown RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 TMEM132CQ8N3T6 1108 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 CNEP1R1Q8N9A8 125 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 PPHLN1Q8NEY8 458 aaKnown RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 OR10H5Q8NGA6 315 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 OR52K1Q8NGK4 314 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 PTPMT1Q8WUK0 201 aaPredicted RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 ATL1Q8WXF7 558 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 WNT2BQ93097 391 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 ALKBH8Q96BT7 664 aaKnown RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 SPACA9Q96E40 222 aaPredicted RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 PGM2Q96G03 612 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 ZNF597Q96LX8 424 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 HS6ST2Q96MM7 605 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 HEMGNQ9BXL5 484 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 KLHL4Q9C0H6 718 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 KLHL31Q9H511 634 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 MANSC1Q9H8J5 431 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 EML4Q9HC35 981 aaKnown RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 CCDC177Q9NQR7 707 aaPredicted RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 FAM114A2Q9NRY5 505 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 DDX56Q9NY93 547 aaKnown RBP8.31□□□□□ -1.08
LSG1-202ENST00000427461 CLCF1Q9UBD9 225 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 KCNS2Q9ULS6 477 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 NENFQ9UMX5 172 aa8.31□□□□□ -1.08
LSG1-202ENST00000427461 A0A0G2JN53 185 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 H0Y3Z8 333 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 VENTXO95231 258 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 CREB1P16220 341 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 CHRM3P20309 590 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 FMO4P31512 558 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 PPARGP37231 505 aaPredicted RBP8.3□□□□□ -1.08
LSG1-202ENST00000427461 PCYT1AP49585 367 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 SKP1P63208 163 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 SIRPAP78324 504 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 PRAMEP78395 509 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 CCZ1BP86790 482 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 CCZ1P86791 482 aaPredicted RBP8.3□□□□□ -1.08
LSG1-202ENST00000427461 ACVR1Q04771 509 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 PWP1Q13610 501 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 RUNX2Q13950 521 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 PHKG1Q16816 387 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 MPEG1Q2M385 716 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
LSG1-202ENST00000427461 ABHD17CQ6PCB6 329 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 REXO1L1PQ8IX06 675 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 ZNF610Q8N9Z0 462 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 FAM47BQ8NA70 645 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 MORN4Q8NDC4 146 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 GABPB2Q8TAK5 448 aaPredicted RBP8.3□□□□□ -1.08
LSG1-202ENST00000427461 SLC35G2Q8TBE7 412 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 SLC2A12Q8TD20 617 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 SMAP2Q8WU79 429 aaPredicted RBP8.3□□□□□ -1.08
LSG1-202ENST00000427461 CTNNBL1Q8WYA6 563 aaPredicted RBP8.3□□□□□ -1.08
LSG1-202ENST00000427461 MRFAP1L1Q96HT8 127 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 RUNDC3BQ96NL0 473 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 AICDAQ9GZX7 198 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 SPNS1Q9H2V7 528 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 ACBD3Q9H3P7 528 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 CATSPERZQ9NTU4 200 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 ELOVL5Q9NYP7 299 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 CNIH4Q9P003 139 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 ARMCX1Q9P291 453 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 ANAPC5Q9UJX4 755 aa8.3□□□□□ -1.08
LSG1-202ENST00000427461 VWFP04275 2813 aa8.29□□□□□ -1.08
LSG1-202ENST00000427461 CD3EAPO15446 510 aaKnown RBP8.29□□□□□ -1.08
LSG1-202ENST00000427461 ETHE1O95571 254 aa8.29□□□□□ -1.08
LSG1-202ENST00000427461 SMIM10L1P0DMW3 83 aa8.29□□□□□ -1.08
LSG1-202ENST00000427461 CPN1P15169 458 aa8.29□□□□□ -1.08
LSG1-202ENST00000427461 PTNP21246 168 aa8.29□□□□□ -1.08
LSG1-202ENST00000427461 RPS3P23396 243 aaKnown RBP eCLIP8.29□□□□□ -1.08
LSG1-202ENST00000427461 ATP5DP30049 168 aa8.29□□□□□ -1.08
LSG1-202ENST00000427461 GRK3P35626 688 aa8.29□□□□□ -1.08
LSG1-202ENST00000427461 TTPAP49638 278 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms