RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 MBD3L3A6NE82 208 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 MIF4GDA9UHW6 222 aaKnown RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 C4orf51C9J302 202 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 TMIGD3P0DMS9 266 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 HNRNPFP52597 415 aaKnown RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 REEP5Q00765 189 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 DHX9Q08211 1270 aaKnown RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 DMTNQ08495 405 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 THOC5Q13769 683 aaKnown RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 RBBP5Q15291 538 aaKnown RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 ACKR1Q16570 336 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 MPEG1Q2M385 716 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF549Q6P9A3 640 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 LUZP2Q86TE4 346 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 ANKRD53Q8N9V6 530 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 OR56A3Q8NH54 315 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 MBD3L2Q8NHZ7 208 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 GABPB2Q8TAK5 448 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 SLC2A12Q8TD20 617 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 PAQR8Q8TEZ7 354 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 PTPMT1Q8WUK0 201 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 NEIL2Q969S2 332 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 GAL3ST3Q96A11 431 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 RUNDC3BQ96NL0 473 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 AIF1LQ9BQI0 150 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 GSX2Q9BZM3 304 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 PRDM14Q9GZV8 571 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 SH2D2AQ9NP31 389 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
HDAC6-206ENST00000426196 PACSIN2Q9UNF0 486 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-206ENST00000426196 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.02□□□□□ -0.339e-8■■■□□ 18
HDAC6-206ENST00000426196 C17orf105B2RV13 164 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 B3GALT2O43825 422 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 F7P08709 466 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 TNNI3P19429 210 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 ASPHQ12797 758 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 STX4Q12846 297 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 SNX1Q13596 522 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 RUNX2Q13950 521 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 RCN2Q14257 317 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF791Q3KP31 576 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 PIGGQ5H8A4 983 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 UGT3A1Q6NUS8 523 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 CASC4Q6P4E1 433 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 ADGRD1Q6QNK2 874 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 SYDE1Q6ZW31 735 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 DENND6AQ8IWF6 608 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 DND1Q8IYX4 353 aaKnown RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 MYO1HQ8N1T3 1032 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF321PQ8N8H1 164 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 TMEM52Q8NDY8 209 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 FAM13CQ8NE31 585 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 EEF1AKMT1Q8WVE0 214 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 SPACA9Q96E40 222 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF597Q96LX8 424 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 TSNARE1Q96NA8 513 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 OR4K3Q96R72 315 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 DOHHQ9BU89 302 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 SFXN3Q9BWM7 321 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 CALHM2Q9HA72 323 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 PELI2Q9HAT8 420 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 ARL15Q9NXU5 204 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 C6orf203Q9P0P8 240 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 VTI1BQ9UEU0 232 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 TESMINQ9Y4I5 508 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 NPFFR2Q9Y5X5 522 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 MAD1L1Q9Y6D9 718 aa13.01□□□□□ -0.33
HDAC6-206ENST00000426196 RAI1Q7Z5J4 1906 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-206ENST00000426196 A0A0G2JN53 185 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 CTAGE15A4D2H0 777 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 BTNL10A8MVZ5 291 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 ERI3O43414 337 aaKnown RBP13□□□□□ -0.33
HDAC6-206ENST00000426196 TRAPPC6AO75865 159 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 IPO7O95373 1038 aaKnown RBP13□□□□□ -0.33
HDAC6-206ENST00000426196 ZSCAN5DPP0CG00 497 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 PTH2RP49190 550 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 RCAN2Q14206 197 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 EFTUD2Q15029 972 aaKnown RBP eCLIP13□□□□□ -0.335e-7■■■■■ 27.1
HDAC6-206ENST00000426196 HEPHL1Q6MZM0 1159 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 C4orf22Q6V702 233 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 TMPRSS11BQ86T26 416 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 CTAGE6Q86UF2 777 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 SYCE1Q8N0S2 351 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 PPP1R14CQ8TAE6 165 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 NUBPLQ8TB37 319 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 C1orf54Q8WWF1 131 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 ATL1Q8WXF7 558 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 ALOXE3Q9BYJ1 711 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 TRIM54Q9BYV2 358 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 AICDAQ9GZX7 198 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 DYRK1BQ9Y463 629 aa13□□□□□ -0.33
HDAC6-206ENST00000426196 MYOCOSA0A1B0GUC4 107 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 CTIFO43310 598 aaKnown RBP12.99□□□□□ -0.33
HDAC6-206ENST00000426196 CTNSO60931 367 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 RPL21P46778 160 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms