RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZDHHC21Q8IVQ6 265 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 CHERPQ8IWX8 916 aaKnown RBP25.09■■□□□ 1.61
LDB1-202ENST00000425280 NFKBIDQ8NI38 313 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 HSH2DQ96JZ2 352 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 CES1P1Q9UKY3 287 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 H0YGG7 62 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 B4GALT2O60909 372 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 ARF3P61204 181 aaPredicted RBP25.09■■□□□ 1.61
LDB1-202ENST00000425280 ARL14Q8N4G2 192 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 CAMKVQ8NCB2 501 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 ZCCHC10Q8TBK6 192 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 IL1RAPQ9NPH3 570 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 SCOCQ9UIL1 159 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 POMT2Q9UKY4 750 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 PADI4Q9UM07 663 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 DOLKQ9UPQ8 538 aa25.09■■□□□ 1.61
LDB1-202ENST00000425280 CHN2P52757 468 aa25.08■■□□□ 1.61
LDB1-202ENST00000425280 IST1P53990 364 aa25.08■■□□□ 1.61
LDB1-202ENST00000425280 ARMC6Q6NXE6 501 aa25.08■■□□□ 1.61
LDB1-202ENST00000425280 SLC48A1Q6P1K1 146 aa25.08■■□□□ 1.61
LDB1-202ENST00000425280 GNGT2O14610 69 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 ERAL1O75616 437 aaKnown RBP25.08■■□□□ 1.6
LDB1-202ENST00000425280 ARAFP10398 606 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 NTSP30990 170 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 FASLGP48023 281 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 TXNL4AP83876 142 aaKnown RBP25.08■■□□□ 1.6
LDB1-202ENST00000425280 SPDYE7PQ495Y7 208 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 CYBRD1Q53TN4 286 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 MAGEE2Q8TD90 523 aaPredicted RBP25.08■■□□□ 1.6
LDB1-202ENST00000425280 TFAP2CQ92754 450 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 BBS4Q96RK4 519 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 DLGAP2Q9P1A6 1054 aa25.08■■□□□ 1.6
LDB1-202ENST00000425280 MAGED1Q9Y5V3 778 aaPredicted RBP25.08■■□□□ 1.6
LDB1-202ENST00000425280 MYO1GB0I1T2 1018 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 TMEM229AB2RXF0 380 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 VILLO15195 856 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 CSNK1EP49674 416 aaKnown RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 NCBP2P52298 156 aaKnown RBP eCLIP25.07■■□□□ 1.61e-7■■■■□ 26
LDB1-202ENST00000425280 DSTNP60981 165 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 RPS26P62854 115 aaKnown RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 CDK6Q00534 326 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 SUZ12Q15022 739 aaKnown RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 ZNF630Q2M218 657 aaPredicted RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 OTUD3Q5T2D3 398 aaPredicted RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 C6orf120Q7Z4R8 191 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 CARM1Q86X55 608 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 ZC3H7AQ8IWR0 971 aaKnown RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 DNASE2BQ8WZ79 361 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 RERGQ96A58 199 aaPredicted RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 CNRIP1Q96F85 164 aaPredicted RBP25.07■■□□□ 1.6
LDB1-202ENST00000425280 TRAPPC9Q96Q05 1148 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 ROGDIQ9GZN7 287 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 SCN3AQ9NY46 2000 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 MUTYHQ9UIF7 546 aa25.07■■□□□ 1.6
LDB1-202ENST00000425280 URADA6NGE7 173 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 NOBOXO60393 691 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 CCT3P49368 545 aaKnown RBP25.06■■□□□ 1.6
LDB1-202ENST00000425280 ZNF750Q32MQ0 723 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 HORMAD2Q8N7B1 307 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 AVL9Q8NBF6 648 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 TPD52L3Q96J77 140 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 ADPRHL2Q9NX46 363 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 ABCG2Q9UNQ0 655 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 AQP9O43315 295 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 HNRNPKP61978 463 aaKnown RBP eCLIP25.06■■□□□ 1.6
LDB1-202ENST00000425280 DUSP2Q05923 314 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 DEFB134Q4QY38 66 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 CEACAM20Q6UY09 585 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 CCDC80Q76M96 950 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 STK32CQ86UX6 486 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 ZDHHC13Q8IUH4 622 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 ZFP28Q8NHY6 868 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 KLHL6Q8WZ60 621 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 SERINC2Q96SA4 455 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 SEMA6CQ9H3T2 930 aa25.06■■□□□ 1.6
LDB1-202ENST00000425280 SMPD3Q9NY59 655 aaPredicted RBP25.06■■□□□ 1.6
LDB1-202ENST00000425280 G3V2T6 193 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 SUV39H1O43463 412 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 UBXN7O94888 489 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 EIF2S1P05198 315 aaKnown RBP25.05■■□□□ 1.6
LDB1-202ENST00000425280 ARSFP54793 590 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 TNFAIP8L2Q6P589 184 aaPredicted RBP25.05■■□□□ 1.6
LDB1-202ENST00000425280 SVOPLQ8N434 492 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 MAFAQ8NHW3 353 aaPredicted RBP25.05■■□□□ 1.6
LDB1-202ENST00000425280 SUN3Q8TAQ9 357 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 ADI1Q9BV57 179 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 ANKRD60Q9BZ19 345 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 PLOD2O00469 737 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 FABP3P05413 133 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 NR2F6P10588 404 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 ST6GAL1P15907 406 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 GPC1P35052 558 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 VLDLRP98155 873 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 MERTKQ12866 999 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 DAG1Q14118 895 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 ABHD13Q7L211 337 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 TMEM179BQ7Z7N9 219 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 DUSP15Q9H1R2 295 aaPredicted RBP25.05■■□□□ 1.6
LDB1-202ENST00000425280 UCK1Q9HA47 277 aa25.05■■□□□ 1.6
LDB1-202ENST00000425280 KCMF1Q9P0J7 381 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms