RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PARP6Q2NL67 630 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GXYLT1Q4G148 440 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 NHSL2Q5HYW2 709 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MROH9Q5TGP6 573 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GPR157Q5UAW9 335 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 STEAP3Q658P3 488 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FAM91A1Q658Y4 838 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 KLHDC10Q6PID8 442 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 HTR3DQ70Z44 454 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RTN4RL1Q86UN2 441 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 KDF1Q8NAX2 398 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FIBINQ8TAL6 211 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 INTS12Q96CB8 462 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PIGQQ9BRB3 760 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF649Q9BS31 505 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 S1PR5Q9H228 398 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GANQ9H2C0 597 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RIBC2Q9H4K1 309 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OSER1Q9NX31 292 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ARL2BPQ9Y2Y0 163 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 NFS1Q9Y697 457 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 AHCTF1Q8WYP5 2266 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NBEAL2Q6ZNJ1 2754 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 KRBA1A5PL33 1030 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 HOXC11O43248 304 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TIMM8AO60220 97 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SRPX2O60687 465 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 S100A1P23297 94 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 RPL4P36578 427 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CCT5P48643 541 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 INPP1P49441 399 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SLC18A1P54219 525 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 UBASH3AP57075 661 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 OR12D2P58182 307 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SHC2P98077 582 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 INSM1Q01101 510 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PMPCAQ10713 525 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NPRL3Q12980 569 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SEMA5AQ13591 1074 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CUL3Q13618 768 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 DNM1P34Q6PK57 102 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 DCUN1D3Q8IWE4 304 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SYT2Q8N9I0 419 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ZBTB44Q8NCP5 570 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TFGQ92734 400 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 USP6NLQ92738 828 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CLDN23Q96B33 292 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CDK15Q96Q40 435 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PSD2Q9BQI7 771 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 REXO4Q9GZR2 422 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TSPAN10Q9H1Z9 355 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM27Q9HBJ8 222 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM33Q9UPN9 1127 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 RPH3AQ9Y2J0 694 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TDRD6O60522 2096 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ASCC3Q8N3C0 2202 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 VSTM2BA6NLU5 285 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 H0YAE9 185 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 YY2O15391 372 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 AKAP10O43572 662 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 RSL1D1O76021 490 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 OR4F21O95013 312 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 OAZ2O95190 189 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 AP2A1O95782 977 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CYP11B1P15538 503 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TBXA2RP21731 343 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 HNMTP50135 292 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 WNT7BP56706 349 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 DBPQ10586 325 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CDK5R2Q13319 367 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 OR8B8Q15620 311 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PRSS36Q5K4E3 855 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 C18orf63Q68DL7 685 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 OR4F3Q6IEY1 312 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LRRC55Q6ZSA7 311 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF761Q86XN6 746 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NUDCD3Q8IVD9 361 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SLC41A1Q8IVJ1 513 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ASCC1Q8N9N2 400 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 AGAP11Q8TF27 550 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PYROXD1Q8WU10 500 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ELMOD3Q96FG2 381 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 DDX31Q9H8H2 851 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 POLD4Q9HCU8 107 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM36Q9NQ86 728 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PRSS16Q9NQE7 514 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PCDHB16Q9NRJ7 776 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 C20orf96Q9NUD7 363 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LYARQ9NX58 379 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 DHCR7Q9UBM7 475 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 MDC1Q14676 2089 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 GPR179Q6PRD1 2367 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SMIM31A0A1B0GVY4 71 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ELOVL7A1L3X0 281 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 OR5H15A6NDH6 313 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ANXA2P2A6NMY6 339 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 H3BML4 177 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 C16orf97H3BN30 126 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms